GO Sensu Terms and Taxonomy -- Apr 2007

the end of sensu & what to do about taxonomy Ontology content meeting GO Apr 2007

Two distinct but related projects ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

Taxon is not a good means of discriminating ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],A more or less rigid stucture enclosing the protoplast of a cell and composed of cellulose and pectin and other organic and inorganic substances . As in, but not restricted to, the flowering plants (Magnoliophyta, ncbi_taxonomy_id:3398 )

Consensus check ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

GO currently has some kind of association to taxons ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

position #1: No to taxa ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

position #2 : Yes to some taxon links ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

Relevance (applicability) ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

[object Object],[object Object]

specificity ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

validity ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

As found in, but not restricted to ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

Difficulties ,[object Object],[object Object],[object Object]

What should GO do? ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

Open questions ,[object Object],[object Object],[object Object],[object Object],[object Object]

Other OBO ontologies ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

Summary ,[object Object],[object Object],[object Object],[object Object],[object Object]

GO Sensu Terms and Taxonomy -- Apr 2007

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GO Sensu Terms and Taxonomy -- Apr 2007

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