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Seamless MLOps with Seldon and
MLflow
Adaptive. Intelligent.
Agile. Intuitive.
Alive. Inspiring.
About me
Adrian Gonzalez-Martin
Machine Learning Engineer
agm@seldon.io
@kaseyo23
github.com/adriangonz
About Seldon
We are hiring!
seldon.io/careers/
Outline
➔ Why is MLOps hard?
➔ Training with MLflow
➔ Serving with Seldon
➔ Demo!
Why is MLOps hard?
Notebooks (by themselves) don’t scale!
What do we mean by MLOps?
Untitled.ipynb
Untitled_3.ipynb
Untitled_2.ipynb
And training is not the end goal!
What do we mean by MLOps?
Data
Processing
Training Serving
DISCLAIMER: This is just a high-level overview!
There is a larger ML lifecycle
What do we mean by MLOps?
Data
Processing
Training
Serving
Data
Lineage
Workflow
Management
Metadata
Management
Experiment
Tracking
Hyperparameter
Optimisation
Packaging Monitoring Explainability
Audit
Trails
Data
Labelling
Distributed
Training
DISCLAIMER: This is just a high-level overview!
What do we mean by MLOps?
“MLOps (a compound of “machine learning” and “operations”)
is a practice for collaboration and communication between
data scientists and operations professionals to help manage
production ML lifecycle.” [1]
[1] https://en.wikipedia.org/wiki/MLOps
Why is MLOps hard?
Managing the ML lifecycle is hard!
➔ Wide heterogeneous requirements
➔ Technically challenging (e.g. monitoring)
➔ Needs to scale up across every ML model!
➔ Organizational challenge
◆ The lifecycle needs to jump across many walls
How can we make MLOps better?
Data
Processing
Training Serving
Training with MLFlow
What is MLflow?
➔ Open Source project initially started by Databricks
➔ Now part of the LFAI
“MLflow is an open source platform to manage the ML
lifecycle, including experimentation, reproducibility,
deployment, and a central model registry.” [2]
[2] https://mlflow.org/
What is MLflow?
MLflow
Project
MLflow
Tracking
S3, Minio,
DBFS, GCS,
etc.
Model
V1
Model
V2
Model
V3
1. run experiment
and track results
2. “log” trained
model
2.1. trained model
goes into a persistent
store
MLflow
Registry
3. model registry keeps
track of model
iterations
➔ MLflow Project
◆ Defines environment, parameters and model’s interface.
➔ MLflow Tracking
◆ API to track experiment results and hyperparameters.
➔ MLflow Model
◆ Snapshot / version of the model.
➔ MLflow Registry
◆ Keeps track of model metadata
What is MLflow?
How does MLflow work?
MLproject
name: mlflow-talk
conda_env: conda.yaml
entry_points:
main:
parameters:
alpha: float
l1_ratio: {type: float, default: 0.1}
command: "python train.py {alpha} {l1_ratio}"
$ mlflow run ./training -P alpha=0.5
$ mlflow run ./training -P alpha=1.0
MLproject file and training
MLmodel
artifact_path: model
flavors:
python_function:
data: model.pkl
env: conda.yaml
loader_module: mlflow.sklearn
python_version: 3.6.9
sklearn:
pickled_model: model.pkl
serialization_format: cloudpickle
sklearn_version: 0.19.1
run_id: 5a6be5a1ef844783a50a6577745dbdc3
utc_time_created: '2019-10-02 14:21:15.783806'
How does MLflow work?
MLmodel snapshot
How does MLflow work?
Serving with Seldon
Deploying models is hard
Analysis Tools
Serving
Infrastructure
Monitoring
Machine
Resource
Management
Process
Management
Tools
Analysis Tools
Serving
Infrastructure
Monitoring
Machine
Resource
Management
Process
Management Tools
ML
Code
Data Verification
Data Collection
Feature Extraction
Configuration
Seldon can help with these...
➔ Serving infrastructure
➔ Scaling up (and down!)
➔ Monitoring models
➔ Updating models
[3] Hidden Technical Debt in Machine Learning Systems, NIPS 2015
What is Seldon Core?
➔ Open Source project created by Seldon
“An MLOps framework to package, deploy, monitor and manage
thousands of production machine learning models” [3]
[3] https://github.com/SeldonIO/seldon-core
Model C
Model A
Feature
Transformation
API
(REST,
gRPC)
Model B
A/B
Test
Multi Armed
Bandit
Direct traffic to the
most optimal
model
Outlier
Detection
Key features to
identify outlier
anomalies (Fraud,
KYC)
Explanation
Why is the model
doing what it’s
doing?
Complex Seldon Core Inference Graph
From model binary
Or language wrapper
Into fully fledged
microservice
Model A
API
(REST,
gRPC)
Simple Seldon Core Inference Graph
1. Containerise
2. Deploy
3. Monitor
What is Seldon Core?
➔ Abstraction for Machine Learning deployments: SeldonDeployment CRD
◆ Simple enough to deploy a model only pointing to stored weights
◆ Powerful enough to keep full control over the created resources
➔ Pre-built inference servers for a subset of ML frameworks
◆ Ability to write custom ones
➔ A/B tests, shadow deployments, etc.
➔ Integrations with Alibi explainers, outlier detectors, etc.
➔ Tools and integrations for monitoring, logging, scaling, etc.
What is Seldon Core?
SeldonDeployment CRD to manage ML deployments
What is Seldon Core?
On-prem
Cloud Native
➔ Built on top of Kubernetes Cloud Native APIs.
➔ All major cloud providers are supported.
➔ On-prem providers such as OpenShift are also
supported.
https://docs.seldon.io/projects/seldon-core/en/latest/examples/notebooks.html
deployment.yaml
apiVersion: machinelearning.seldon.io/v1
kind: SeldonDeployment
metadata:
name: example-model
spec:
name: example
predictors:
- componentSpecs:
- spec:
containers:
- image: model:0.1
name: my-model
- image: transformer:0.1
name: input-transformer
- image: combiner:0.1
name: model-combiner
graph:
name: input-transformer
type: TRANSFORMER
children:
- name: model-combiner
type: COMBINER
children:
- name: my-model
type: MODEL
- name: classifier
implementation: MLFLOW_SERVER
modelUri: gs://seldon-models/mlflow/model-a
name: default
replicas: 1
SeldonDeployment Pod
input-transformer
my-model classifier
model-combinerorchestrator
kubectl apply -f
deployment.yaml
Orchestrate
requests
between
components
init-container
Downloads
model
artifacts
How does Seldon Core work?
➔ Pre-packaged servers for common ML frameworks.
How does Seldon Core work?
Inference Servers
model-a
SeldonDeployment CR
model-b
SeldonDeployment CR
model-a
model-b.bst
.
.
.
https://docs.seldon.io/projects/seldon-core/en/latest/servers/overview.html
How does Seldon Core work?
Monitoring
https://docs.seldon.io/projects/seldon-core/en/latest/examples/notebooks.html
➔ Seldon leverages KNative for async pipelines which handle:
◆ Outlier detection (through Alibi Detect)
◆ Drift detection (through Alibi Detect)
◆ Custom metrics
How does Seldon Core work?
Monitoring
https://docs.seldon.io/projects/seldon-core/en/latest/examples/notebooks.html
How does Seldon Core work?
Auditability
https://docs.seldon.io/projects/seldon-core/en/latest/examples/notebooks.html
How does Seldon Core work?
Explainability
https://github.com/seldonio/alibi
How does Seldon Core work?
Advanced Deployment Models
https://docs.seldon.io/projects/seldon-core/en/latest/examples/mlflow_server_ab_test_ambassador.html
a-b-deployment.yaml
apiVersion: machinelearning.seldon.io/v1alpha2
kind: SeldonDeployment
metadata:
name: wines-classifier
spec:
name: wines-classifier
predictors:
- graph:
children: []
implementation: MLFLOW_SERVER
modelUri: gs://seldon-models/mlflow/model-a
name: wines-classifier
name: model-a
replicas: 1
traffic: 50
- graph:
children: []
implementation: MLFLOW_SERVER
modelUri: gs://seldon-models/mlflow/model-b
name: wines-classifier
name: model-b
replicas: 1
traffic: 50
➔ A/B Tests
◆ We’ll see this in the demo!
➔ Shadow Deployments
Demo!
https://github.com/adriangonz/mlflow-talk
6.5 2.3 ?
➔ We want to predict wine quality for new wines
➔ We want to listen to feedback from customers
Demo
Wine e-commerce
Demo
Fixed
Acidity
Volatile
Acidity
Citric
Acid
... Sulphates Alcohol Quality
7 0.27 0.36 0.45 8.8 6
6.3 0.3 0.34 0.49 9.5 7
8.1 0.28 0.4 0.44 10.1 1
7.2 0.23 0.32 0.4 9.9 2
7.2 0.23 0.32 0.4 9.9 5
...
Wine quality dataset
➔ Linear regression with L1 and L2 regularisers.
➔ Two hyperparameters:
Demo
ElasticNet
Demo
Wine
Project
MLflow
Tracking
GCS
Model
A
Model
B
1. run experiment
and track results
2. “log” trained
model
2.1. trained model
goes into a persistent
store
Training
Demo
Hyperparameter setting?
➔ Train two versions of ElasticNet
➔ It’s not clear which one would be better in production
➔ Deploy both and do A/B test based on user’s feedback
Model A Model B
?Which one is best?
Demo
Serving SeldonDeployment CR
model-a
model-b
GCS
Model A
Model B
A/B Test
Router
Demo a-b-deployment.yaml
apiVersion: machinelearning.seldon.io/v1alpha2
kind: SeldonDeployment
metadata:
name: wines-classifier
spec:
name: wines-classifier
predictors:
- graph:
children: []
implementation: MLFLOW_SERVER
modelUri: gs://seldon-models/mlflow/model-a
name: wines-classifier
name: model-a
replicas: 1
traffic: 50
- graph:
children: []
implementation: MLFLOW_SERVER
modelUri: gs://seldon-models/mlflow/model-b
name: wines-classifier
name: model-b
replicas: 1
traffic: 50
Serving
Model A
Model B
{
{
Demo
Feedback SeldonDeployment CR
model-a
model-b
A/B Test
Router
Feedback
(reward signal)
➔ Reward signal based
on “proxy metric”:
◆ Sales
◆ User rating
Feedback
Demo
➔ We can build a rough reward signal using the squared error
Seldon Analytics
Demo
https://github.com/adriangonz/mlflow-talk
Thanks!
agm@seldon.io
@kaseyo23
github.com/adriangonz
We are hiring!
seldon.io/careers/
Feedback
Your feedback is important to us.
Don’t forget to rate
and review the sessions.

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Seamless MLOps with Seldon and MLflow

  • 1. Seamless MLOps with Seldon and MLflow Adaptive. Intelligent. Agile. Intuitive. Alive. Inspiring.
  • 2. About me Adrian Gonzalez-Martin Machine Learning Engineer agm@seldon.io @kaseyo23 github.com/adriangonz
  • 3. About Seldon We are hiring! seldon.io/careers/
  • 4. Outline ➔ Why is MLOps hard? ➔ Training with MLflow ➔ Serving with Seldon ➔ Demo!
  • 5. Why is MLOps hard?
  • 6. Notebooks (by themselves) don’t scale! What do we mean by MLOps? Untitled.ipynb Untitled_3.ipynb Untitled_2.ipynb
  • 7. And training is not the end goal! What do we mean by MLOps? Data Processing Training Serving DISCLAIMER: This is just a high-level overview!
  • 8. There is a larger ML lifecycle What do we mean by MLOps? Data Processing Training Serving Data Lineage Workflow Management Metadata Management Experiment Tracking Hyperparameter Optimisation Packaging Monitoring Explainability Audit Trails Data Labelling Distributed Training DISCLAIMER: This is just a high-level overview!
  • 9. What do we mean by MLOps? “MLOps (a compound of “machine learning” and “operations”) is a practice for collaboration and communication between data scientists and operations professionals to help manage production ML lifecycle.” [1] [1] https://en.wikipedia.org/wiki/MLOps
  • 10. Why is MLOps hard? Managing the ML lifecycle is hard! ➔ Wide heterogeneous requirements ➔ Technically challenging (e.g. monitoring) ➔ Needs to scale up across every ML model! ➔ Organizational challenge ◆ The lifecycle needs to jump across many walls
  • 11. How can we make MLOps better? Data Processing Training Serving
  • 13. What is MLflow? ➔ Open Source project initially started by Databricks ➔ Now part of the LFAI “MLflow is an open source platform to manage the ML lifecycle, including experimentation, reproducibility, deployment, and a central model registry.” [2] [2] https://mlflow.org/
  • 14. What is MLflow? MLflow Project MLflow Tracking S3, Minio, DBFS, GCS, etc. Model V1 Model V2 Model V3 1. run experiment and track results 2. “log” trained model 2.1. trained model goes into a persistent store MLflow Registry 3. model registry keeps track of model iterations
  • 15. ➔ MLflow Project ◆ Defines environment, parameters and model’s interface. ➔ MLflow Tracking ◆ API to track experiment results and hyperparameters. ➔ MLflow Model ◆ Snapshot / version of the model. ➔ MLflow Registry ◆ Keeps track of model metadata What is MLflow?
  • 16. How does MLflow work? MLproject name: mlflow-talk conda_env: conda.yaml entry_points: main: parameters: alpha: float l1_ratio: {type: float, default: 0.1} command: "python train.py {alpha} {l1_ratio}" $ mlflow run ./training -P alpha=0.5 $ mlflow run ./training -P alpha=1.0 MLproject file and training
  • 17. MLmodel artifact_path: model flavors: python_function: data: model.pkl env: conda.yaml loader_module: mlflow.sklearn python_version: 3.6.9 sklearn: pickled_model: model.pkl serialization_format: cloudpickle sklearn_version: 0.19.1 run_id: 5a6be5a1ef844783a50a6577745dbdc3 utc_time_created: '2019-10-02 14:21:15.783806' How does MLflow work? MLmodel snapshot
  • 20. Deploying models is hard Analysis Tools Serving Infrastructure Monitoring Machine Resource Management Process Management Tools Analysis Tools Serving Infrastructure Monitoring Machine Resource Management Process Management Tools ML Code Data Verification Data Collection Feature Extraction Configuration Seldon can help with these... ➔ Serving infrastructure ➔ Scaling up (and down!) ➔ Monitoring models ➔ Updating models [3] Hidden Technical Debt in Machine Learning Systems, NIPS 2015
  • 21. What is Seldon Core? ➔ Open Source project created by Seldon “An MLOps framework to package, deploy, monitor and manage thousands of production machine learning models” [3] [3] https://github.com/SeldonIO/seldon-core
  • 22. Model C Model A Feature Transformation API (REST, gRPC) Model B A/B Test Multi Armed Bandit Direct traffic to the most optimal model Outlier Detection Key features to identify outlier anomalies (Fraud, KYC) Explanation Why is the model doing what it’s doing? Complex Seldon Core Inference Graph From model binary Or language wrapper Into fully fledged microservice Model A API (REST, gRPC) Simple Seldon Core Inference Graph 1. Containerise 2. Deploy 3. Monitor What is Seldon Core?
  • 23. ➔ Abstraction for Machine Learning deployments: SeldonDeployment CRD ◆ Simple enough to deploy a model only pointing to stored weights ◆ Powerful enough to keep full control over the created resources ➔ Pre-built inference servers for a subset of ML frameworks ◆ Ability to write custom ones ➔ A/B tests, shadow deployments, etc. ➔ Integrations with Alibi explainers, outlier detectors, etc. ➔ Tools and integrations for monitoring, logging, scaling, etc. What is Seldon Core? SeldonDeployment CRD to manage ML deployments
  • 24. What is Seldon Core? On-prem Cloud Native ➔ Built on top of Kubernetes Cloud Native APIs. ➔ All major cloud providers are supported. ➔ On-prem providers such as OpenShift are also supported. https://docs.seldon.io/projects/seldon-core/en/latest/examples/notebooks.html
  • 25. deployment.yaml apiVersion: machinelearning.seldon.io/v1 kind: SeldonDeployment metadata: name: example-model spec: name: example predictors: - componentSpecs: - spec: containers: - image: model:0.1 name: my-model - image: transformer:0.1 name: input-transformer - image: combiner:0.1 name: model-combiner graph: name: input-transformer type: TRANSFORMER children: - name: model-combiner type: COMBINER children: - name: my-model type: MODEL - name: classifier implementation: MLFLOW_SERVER modelUri: gs://seldon-models/mlflow/model-a name: default replicas: 1 SeldonDeployment Pod input-transformer my-model classifier model-combinerorchestrator kubectl apply -f deployment.yaml Orchestrate requests between components init-container Downloads model artifacts How does Seldon Core work?
  • 26. ➔ Pre-packaged servers for common ML frameworks. How does Seldon Core work? Inference Servers model-a SeldonDeployment CR model-b SeldonDeployment CR model-a model-b.bst . . . https://docs.seldon.io/projects/seldon-core/en/latest/servers/overview.html
  • 27. How does Seldon Core work? Monitoring https://docs.seldon.io/projects/seldon-core/en/latest/examples/notebooks.html
  • 28. ➔ Seldon leverages KNative for async pipelines which handle: ◆ Outlier detection (through Alibi Detect) ◆ Drift detection (through Alibi Detect) ◆ Custom metrics How does Seldon Core work? Monitoring https://docs.seldon.io/projects/seldon-core/en/latest/examples/notebooks.html
  • 29. How does Seldon Core work? Auditability https://docs.seldon.io/projects/seldon-core/en/latest/examples/notebooks.html
  • 30. How does Seldon Core work? Explainability https://github.com/seldonio/alibi
  • 31. How does Seldon Core work? Advanced Deployment Models https://docs.seldon.io/projects/seldon-core/en/latest/examples/mlflow_server_ab_test_ambassador.html a-b-deployment.yaml apiVersion: machinelearning.seldon.io/v1alpha2 kind: SeldonDeployment metadata: name: wines-classifier spec: name: wines-classifier predictors: - graph: children: [] implementation: MLFLOW_SERVER modelUri: gs://seldon-models/mlflow/model-a name: wines-classifier name: model-a replicas: 1 traffic: 50 - graph: children: [] implementation: MLFLOW_SERVER modelUri: gs://seldon-models/mlflow/model-b name: wines-classifier name: model-b replicas: 1 traffic: 50 ➔ A/B Tests ◆ We’ll see this in the demo! ➔ Shadow Deployments
  • 33. 6.5 2.3 ? ➔ We want to predict wine quality for new wines ➔ We want to listen to feedback from customers Demo Wine e-commerce
  • 34. Demo Fixed Acidity Volatile Acidity Citric Acid ... Sulphates Alcohol Quality 7 0.27 0.36 0.45 8.8 6 6.3 0.3 0.34 0.49 9.5 7 8.1 0.28 0.4 0.44 10.1 1 7.2 0.23 0.32 0.4 9.9 2 7.2 0.23 0.32 0.4 9.9 5 ... Wine quality dataset
  • 35. ➔ Linear regression with L1 and L2 regularisers. ➔ Two hyperparameters: Demo ElasticNet
  • 36. Demo Wine Project MLflow Tracking GCS Model A Model B 1. run experiment and track results 2. “log” trained model 2.1. trained model goes into a persistent store Training
  • 37. Demo Hyperparameter setting? ➔ Train two versions of ElasticNet ➔ It’s not clear which one would be better in production ➔ Deploy both and do A/B test based on user’s feedback Model A Model B ?Which one is best?
  • 39. Demo a-b-deployment.yaml apiVersion: machinelearning.seldon.io/v1alpha2 kind: SeldonDeployment metadata: name: wines-classifier spec: name: wines-classifier predictors: - graph: children: [] implementation: MLFLOW_SERVER modelUri: gs://seldon-models/mlflow/model-a name: wines-classifier name: model-a replicas: 1 traffic: 50 - graph: children: [] implementation: MLFLOW_SERVER modelUri: gs://seldon-models/mlflow/model-b name: wines-classifier name: model-b replicas: 1 traffic: 50 Serving Model A Model B { {
  • 40. Demo Feedback SeldonDeployment CR model-a model-b A/B Test Router Feedback (reward signal) ➔ Reward signal based on “proxy metric”: ◆ Sales ◆ User rating
  • 41. Feedback Demo ➔ We can build a rough reward signal using the squared error
  • 45. Feedback Your feedback is important to us. Don’t forget to rate and review the sessions.