IMPACT/myGrid Hackathon - Introduction to Taverna

An Introduction to Designing, Executing and Sharing Workflows with Taverna Katy Wolstencroft myGrid University of Manchester IMPACT/Taverna Hackathon 2011

Exercise 1: Exploring the Workbench ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

Taverna Workbench Workflow Diagram Services Panel Workflow Explorer

1. Workflow Diagram ,[object Object],[object Object],[object Object],[object Object]

1. Workflow Explorer ,[object Object],[object Object]

1. Available Services Panel ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

[object Object],[object Object],[object Object],[object Object],Exercise 2: Building a Simple Workflow ,[object Object]

Exercise 2: Building a Simple Workflow ,[object Object],[object Object],[object Object]

Exercise 2: Building a Simple Workflow ,[object Object],[object Object],[object Object],Show Ports

Exercise 2: Building a Simple Workflow ,[object Object],Link the image output of ‘get_image_from_url’ to the workflow output port

Exercise 2: Building a Simple Workflow ,[object Object]

Exercise 2: Building a Simple Workflow ,[object Object],Click on ‘New Value’ in the input window and add the url http://www.archives.gov/exhibits/featured_documents/magna_carta/images/magna_carta.jpg where it says “some input data goes here”

2: Adding a Workflow Description ,[object Object],[object Object],[object Object],[object Object],[object Object]

[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Exercise 3: Adding New Services

3. Adding New Services ,[object Object],[object Object]

Exercise 4: Sharing and Reusing Workflows ,[object Object],[object Object],[object Object],[object Object],[object Object]

4. Sharing and Reusing workflows ,[object Object],[object Object],[object Object]

5. Using Workflows from myExperiment ,[object Object],[object Object]

5. Using Workflows from myExperiment ,[object Object],[object Object],[object Object],[object Object],[object Object]

5. Validate your Workflow ,[object Object],[object Object],[object Object],[object Object],[object Object]

5. Using Workflows from myExperiment ,[object Object],[object Object],[object Object],[object Object]

6. Reusing and connecting Workflows ,[object Object],[object Object],[object Object],[object Object]

6. Reusing and connecting Workflows ,[object Object],[object Object],[object Object],[object Object],[object Object]

7. Looking at Intermediate Results ,[object Object],[object Object],[object Object]

Controlling data flow in Workflows Advanced Exercises

[object Object],[object Object],[object Object],[object Object],8. Iteration

[object Object],[object Object],8. Iteration

9. Retries: Making your Workflow Robust ,[object Object],[object Object],[object Object],[object Object]

9. Retries: Making your Workflow Robust ,[object Object],[object Object],[object Object],[object Object],[object Object]

10. Looping ,[object Object],[object Object],[object Object]

10. Looping ,[object Object],[object Object],[object Object],[object Object]

[object Object],[object Object],11. Control Links

11. Control Links ,[object Object],[object Object],[object Object],[object Object],[object Object]

IMPACT/myGrid Hackathon - Introduction to Taverna

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