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Mary K. Campbell
         Shawn O. Farrell
         http://academic.cengage.com/chemistry/campbell




              Chapter 15
The Importance of Energy Changes and
      Electron Transfer in Biology



      Paul D. Adams • University of Arkansas
The Nature of Metabolism
• Metabolism: the chemical reactions of
  biomolecules. It is the biochemical basis of life
  processes
   • catabolism: the breakdown of larger molecules into
     smaller ones; an oxidative process that releases
     energy
   • anabolism: the synthesis of larger molecules from
     smaller ones; a reductive process that requires energy
A Comparison of Catabolism and
Anabolism
• Metabolism is the sum total of the chemical reactions
  of biomolecules in an organism
Summary
• In catabolism, large molecules are broken down to
  smaller products, releasing energy and transferring
  electrons to acceptor molecules of various sorts. The
  overall process is one of oxidation.

• In anabolism, small molecules react to give rise to
  larger ones; this process requires energy and
  involves acceptance of electrons from a variety of
  donors. The overall process is one of reduction
Coenzymes used in Biologically important
Redox Reactions
• Conversion of ethanol to acetaldehyde is a two-
  electron oxidation
NAD+/NADH: An Important Coenzyme
• Nicotinamide adenine dinucleotide (NAD+) is an
  important coenzyme
• Acts as a biological oxidizing agent
• The structure of NADH is comprised of a
  nicotinamide portion. It is involved in the reaction. It
  is a derivative of nicotinic acid
• NAD+ is a two-electron oxidizing agent, and is
  reduced to NADH
The Structures and Redox States of the
Nicotinamide Coenzymes
FAD/FADH2
• Flavin adenine dinucleotide (FAD) is also a biological
  oxidizing agent
• Protons, as well as, electrons are accepted by FAD
The Structures of Riboflavin, Flavin Mono-
nucleotide (FMN), and Flavin Dinucleotide (FAD)
Coupling of Production and Use of Energy
• The coupling of energy-producing and energy-
  requiring reactions is a central theme in the
  metabolism of all organisms
• Energy cannot be used directly, must by shuttled into
  easily accessible forms of chemical energy
• “High Energy” bonds- bonds that require or
  release convenient amounts of energy, depending
  on the direction of the reaction
• ATP is essential high energy bond-containing
  compound
• Phosphorylation of ADP to ATP requires energy
• Hydrolysis of ATP to ADP releases energy
The Phosphoric Anhydride Bonds in ATP
are “High Energy” Bonds
ATP
• 4 (-) charges on ATP and 3 on ADP, therefore ATP
  is less stable.
• Why is ATP less stable, charge-wise, than ADP?
  • Energy must be expended to put on additional
    negative charge on ADP
  • Also, entropy loss when ADP is phosphorylated
    because there is a potential loss of resonance
    hybridization of inorganic phosphate (Pi) upon
    phosphorylation of ADP to ATP
Loss of a Resonance-Stabilized Phosphate
Ion in Production of ATP
ATP Hydrolysis Decreases in Electrostatic
Repulsion
• Marked decrease in
  electrostatic repulsion
  of β-phosphate of
  GDP upon hydrolysis of
  ATP to ADP
Role of ATP as Energy Currency
Summary
• Hydrolysis of ATP to ADP releases energy

• In the coupling of biochemical reactions, the energy
  released by one reaction, such as ATP hydrolysis,
  provides energy for another
Coenzyme A in Activation of Metabolic
Pathways
• A step frequently encountered in metabolism is
  activation
  • activation: the formation of a more reactive
    substance
  • A metabolite is bonded to some other molecule and
    the free-energy change for breaking the new bond is
    negative.
  • Causes next reaction to be exergonic
Two Ways of Looking at Coenzyme A
• Coenzyme A (CoA-SH) contains units of 2-
  mercaptoethylamine, pantothenic acid, and 3’,5’-
  mercaptoethylamine
  ADP
The Hydrolysis of Acetyl-CoA
• The metabolically active form of a carboxylic acid is
  the corresponding acyl-CoA thioester, in which the
  thioester linkage is a high-energy bond
The Role of Electron Transfer and ATP
Production in metabolism
Summary
• Metabolic pathways proceed in many stages,
  allowing for efficient use of energy

• Many coenzymes, particularly coenzyme A(CoA)
  play a crucial role in metabolism

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Metabolism i-chp-15-bioc-361-version-oct-2012 - Intro

  • 1. Mary K. Campbell Shawn O. Farrell http://academic.cengage.com/chemistry/campbell Chapter 15 The Importance of Energy Changes and Electron Transfer in Biology Paul D. Adams • University of Arkansas
  • 2. The Nature of Metabolism • Metabolism: the chemical reactions of biomolecules. It is the biochemical basis of life processes • catabolism: the breakdown of larger molecules into smaller ones; an oxidative process that releases energy • anabolism: the synthesis of larger molecules from smaller ones; a reductive process that requires energy
  • 3. A Comparison of Catabolism and Anabolism • Metabolism is the sum total of the chemical reactions of biomolecules in an organism
  • 4. Summary • In catabolism, large molecules are broken down to smaller products, releasing energy and transferring electrons to acceptor molecules of various sorts. The overall process is one of oxidation. • In anabolism, small molecules react to give rise to larger ones; this process requires energy and involves acceptance of electrons from a variety of donors. The overall process is one of reduction
  • 5. Coenzymes used in Biologically important Redox Reactions • Conversion of ethanol to acetaldehyde is a two- electron oxidation
  • 6. NAD+/NADH: An Important Coenzyme • Nicotinamide adenine dinucleotide (NAD+) is an important coenzyme • Acts as a biological oxidizing agent • The structure of NADH is comprised of a nicotinamide portion. It is involved in the reaction. It is a derivative of nicotinic acid • NAD+ is a two-electron oxidizing agent, and is reduced to NADH
  • 7. The Structures and Redox States of the Nicotinamide Coenzymes
  • 8. FAD/FADH2 • Flavin adenine dinucleotide (FAD) is also a biological oxidizing agent • Protons, as well as, electrons are accepted by FAD
  • 9. The Structures of Riboflavin, Flavin Mono- nucleotide (FMN), and Flavin Dinucleotide (FAD)
  • 10. Coupling of Production and Use of Energy • The coupling of energy-producing and energy- requiring reactions is a central theme in the metabolism of all organisms • Energy cannot be used directly, must by shuttled into easily accessible forms of chemical energy • “High Energy” bonds- bonds that require or release convenient amounts of energy, depending on the direction of the reaction • ATP is essential high energy bond-containing compound • Phosphorylation of ADP to ATP requires energy • Hydrolysis of ATP to ADP releases energy
  • 11. The Phosphoric Anhydride Bonds in ATP are “High Energy” Bonds
  • 12. ATP • 4 (-) charges on ATP and 3 on ADP, therefore ATP is less stable. • Why is ATP less stable, charge-wise, than ADP? • Energy must be expended to put on additional negative charge on ADP • Also, entropy loss when ADP is phosphorylated because there is a potential loss of resonance hybridization of inorganic phosphate (Pi) upon phosphorylation of ADP to ATP
  • 13. Loss of a Resonance-Stabilized Phosphate Ion in Production of ATP
  • 14. ATP Hydrolysis Decreases in Electrostatic Repulsion • Marked decrease in electrostatic repulsion of β-phosphate of GDP upon hydrolysis of ATP to ADP
  • 15. Role of ATP as Energy Currency
  • 16. Summary • Hydrolysis of ATP to ADP releases energy • In the coupling of biochemical reactions, the energy released by one reaction, such as ATP hydrolysis, provides energy for another
  • 17. Coenzyme A in Activation of Metabolic Pathways • A step frequently encountered in metabolism is activation • activation: the formation of a more reactive substance • A metabolite is bonded to some other molecule and the free-energy change for breaking the new bond is negative. • Causes next reaction to be exergonic
  • 18. Two Ways of Looking at Coenzyme A • Coenzyme A (CoA-SH) contains units of 2- mercaptoethylamine, pantothenic acid, and 3’,5’- mercaptoethylamine ADP
  • 19. The Hydrolysis of Acetyl-CoA • The metabolically active form of a carboxylic acid is the corresponding acyl-CoA thioester, in which the thioester linkage is a high-energy bond
  • 20. The Role of Electron Transfer and ATP Production in metabolism
  • 21. Summary • Metabolic pathways proceed in many stages, allowing for efficient use of energy • Many coenzymes, particularly coenzyme A(CoA) play a crucial role in metabolism