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From novice to expert:
Supporting all levels of computational
expertise in reproducible research methods
Kate Hertweck and Carly Strasser
Fred Hutchinson Cancer Research Center
@k8hert
How do I do [some task]?
Kate Hertweck (@k8hert), Supporting all levels of expertise
realityexpectation
help(print)
Kate Hertweck (@k8hert), Supporting all levels of expertise
fredhutch.io
thecoop.fredhutch.org
Kate Hertweck (@k8hert), Supporting all levels of expertise
thecoop.fredhutch.org
The Coop Community
Biomedical and clinical
research experts
Variable acceptance of
open science principles
Customizable and flexible
solutions required
Kate Hertweck (@k8hert), Supporting all levels of expertise
Novice
Competent
practitioner
Expert
Application of
computational
skills to own
research
Routine application
of skills and
adoption of best
practices
Levels of computational expertise
Kate Hertweck (@k8hert), Supporting all levels of expertise
Kate Hertweck (@k8hert), Supporting all levels of expertise
What are the pressure points for adoption
of reproducible computational methods?
What do people need to learn?
+
How are they most likely to learn?
Kate Hertweck (@k8hert), Supporting all levels of expertise
Types of support: short courses
fredhutch.io/resources
carpentries.org
Materials adapted to
suit the specific needs
of our community
Kate Hertweck (@k8hert), Supporting all levels of expertise
Types of support: code examples/templates
Application of code to
common workflows
Code that works, but is
also aligned with best
practices
Kate Hertweck (@k8hert), Supporting all levels of expertise
Types of support: demos and tutorials
Bridge between reference
documentation and
developing code for a
specific project
Kate Hertweck (@k8hert), Supporting all levels of expertise
Types of support: SciWiki
sciwiki.fredhutch.org
SciWiki pageviews
Kate Hertweck (@k8hert), Supporting all levels of expertise
SciWiki users
sciwiki.fredhutch.org
The usefulness of training and
documentation depends on both what
information is provided, and how it’s
delivered.
Kate Hertweck (@k8hert), Supporting all levels of expertise
Learning technical skills is “easy.”
Learning to apply technical skills to your own
research problems is much more difficult.
thecoop.fredhutch.org/
carpentries.org
@k8hert
katehertweck.com
slideshare.net/katehertweck
Hertweck and Strasser, 2020, PEARC
Carly Strasser
Best practices in online
teaching for Spanish
speakers
metadocencia.netlify.app/
MetaDocencia

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From Novice to Expert: Supporting All Levels of Computational Expertise in Reproducible Research Methods

  • 1. From novice to expert: Supporting all levels of computational expertise in reproducible research methods Kate Hertweck and Carly Strasser Fred Hutchinson Cancer Research Center @k8hert
  • 2. How do I do [some task]? Kate Hertweck (@k8hert), Supporting all levels of expertise realityexpectation help(print)
  • 3. Kate Hertweck (@k8hert), Supporting all levels of expertise fredhutch.io thecoop.fredhutch.org
  • 4. Kate Hertweck (@k8hert), Supporting all levels of expertise thecoop.fredhutch.org The Coop Community Biomedical and clinical research experts Variable acceptance of open science principles Customizable and flexible solutions required
  • 5. Kate Hertweck (@k8hert), Supporting all levels of expertise Novice Competent practitioner Expert Application of computational skills to own research Routine application of skills and adoption of best practices Levels of computational expertise
  • 6. Kate Hertweck (@k8hert), Supporting all levels of expertise
  • 7. Kate Hertweck (@k8hert), Supporting all levels of expertise What are the pressure points for adoption of reproducible computational methods? What do people need to learn? + How are they most likely to learn?
  • 8. Kate Hertweck (@k8hert), Supporting all levels of expertise Types of support: short courses fredhutch.io/resources carpentries.org Materials adapted to suit the specific needs of our community
  • 9. Kate Hertweck (@k8hert), Supporting all levels of expertise Types of support: code examples/templates Application of code to common workflows Code that works, but is also aligned with best practices
  • 10. Kate Hertweck (@k8hert), Supporting all levels of expertise Types of support: demos and tutorials Bridge between reference documentation and developing code for a specific project
  • 11. Kate Hertweck (@k8hert), Supporting all levels of expertise Types of support: SciWiki sciwiki.fredhutch.org
  • 12. SciWiki pageviews Kate Hertweck (@k8hert), Supporting all levels of expertise SciWiki users sciwiki.fredhutch.org
  • 13. The usefulness of training and documentation depends on both what information is provided, and how it’s delivered. Kate Hertweck (@k8hert), Supporting all levels of expertise Learning technical skills is “easy.” Learning to apply technical skills to your own research problems is much more difficult.
  • 14. thecoop.fredhutch.org/ carpentries.org @k8hert katehertweck.com slideshare.net/katehertweck Hertweck and Strasser, 2020, PEARC Carly Strasser Best practices in online teaching for Spanish speakers metadocencia.netlify.app/ MetaDocencia