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                                                   Prostaglandins, Leukotrienes and Essential Fatty Acids 79 (2008) 131–134



                                             Contents lists available at ScienceDirect

                                   Prostaglandins, Leukotrienes and
                                         Essential Fatty Acids
                                    journal homepage: www.elsevier.com/locate/plefa




Insights from biophysical studies on the role of polyunsaturated fatty acids
for function of G-protein coupled membrane receptors
Klaus Gawrisch a,Ã, Olivier Soubias a, Mihaela Mihailescu b
a
    Section of NMR, Laboratory of Membrane Biochemistry and Biophysics, NIAAA, NIH, Bethesda, MD 20892, USA
b
    Department of Physiology and Biophysics, University of California, Irvine, CA, USA




a r t i c l e in fo                                    abstract

                                                       The composition of the lipid matrix is critical for function of membrane proteins. Perhaps one of the
Keywords:                                              best studied examples is the function of the G-protein-coupled membrane receptor (GPCR) rhodopsin
Docosahexaenoic acid                                   which is located in membranes with high content of phospholipids with polyunsaturated docosahex-
G-protein-coupled membrane receptor                    aenoic acid chains (DHA, 22:6n-3). Technological advances enabled a more detailed study of structure
Rhodopsin                                              and dynamics of DHA chains and their interaction with rhodopsin. It was established that
Nuclear Magnetic Resonance                             polyunsaturated DHA differs from saturated and monounsaturated hydrocarbon chains by far more
Neutron Scattering                                     rapid structural conversions. Furthermore, DHA chains tend to have higher density near the lipid/water
                                                       interface while density of saturated chains is higher in the bilayer center. The interface of rhodopsin has
                                                       a small number of sites for tighter interaction with DHA. Polyunsaturated phosphatidylethanolamines
                                                       accumulate preferentially near the protein. Surprisingly, the high conformational freedom of most DHA
                                                       chains is not measurably reduced upon interaction with rhodopsin. While some observations point at an
                                                       involvement of continuum elastic properties of membranes in modulation of rhodopsin function, there
                                                       is growing evidence for a role of weakly specific DHA–rhodopsin interactions.
                                                                                                                         & 2008 Elsevier Ltd. All rights reserved.



1. Conformation and dynamics of DHA                                                       But in the past decade our view of DHA has changed. Early
                                                                                       molecular simulations by Rabinovitch and Ripatty [11] suggested
    Ever since it was established that the disks of rod outer segments                 that the unique electronic structure of polyunsaturated chains
of the retina contain the highly unsaturated docosahexaenoic acid                      may permit rapid conformational changes. Recent experimental
(DHA, 22:6n-3) at concentrations up to 50 mol% of all fatty acids,                     studies at our laboratory as well as quantum chemical calcula-
speculation arose that peculiarities in DHA structure and dynamics                     tions and molecular dynamics simulations by our collaborators
may impart unique biophysical properties on membranes that could                       revealed the full magnitude of conformational flexibility of DHA
modulate rhodopsin function. This was confirmed by reconstitution                       [12,13]. High conformational flexibility of DHA chains was
of rhodopsin into bilayers with varying degree of unsaturation                         reported by Brown and collaborators [14,15], the Davis [16], as
followed by a measurement of the metarhodopsin I/metarhodopsin                         well as the Klein laboratory [17,18]. Our 13C MAS NMR relaxation
II (MI/MII) ratio after photoactivation [1–3].                                         experiments have shown that DHA isomerizes on the timescale of
    How do membranes that are rich in DHA differ from less                             1–100 ps and explore their entire conformational space within
unsaturated ones? For a long time it is known that lipids in                           10 ns [19]. Experimental results clearly indicate that low order in
polyunsaturated membranes have low order [4–7]. Initially it was                       bilayers with high DHA content is a direct consequence of high
proposed that low order may result from perturbations caused by                        conformational flexibility and of rapid structural conversions of
rigidity and bulkiness of polyunsaturated hydrocarbon chains.                          DHA chains themselves. Quantum chemical and molecular
Indeed, DHA has a unique chemical structure with six cis-locked                        mechanical calculations revealed that this flexibility is caused
double bounds. The number of degrees of freedom of DHA chains                          by extremely low potential barriers for changes of dihedral bond
is substantially lower which could be indicative for rigidity.                         angles in vinyl bonds [12]. Low potential barriers permit the
Polyunsaturated chains in crystals form highly ordered, elongated                      polyunsaturated chains to rapidly change conformation without
structures with angle-iron or helical arrangement of double bonds                      significant energetic penalty (Fig. 1).
[8]. Such structures were also observed by molecular mechanics
calculations conducted at low temperature [9,10].
                                                                                       2. Nonspecific DHA–protein interactions

    Ã Corresponding author.                                                                In continuum models of lipid–protein interaction, the influence
      E-mail address: klausg@mail.nih.gov (K. Gawrisch).                               of the lipid matrix on protein function can be expressed as lateral

0952-3278/$ - see front matter & 2008 Elsevier Ltd. All rights reserved.
doi:10.1016/j.plefa.2008.09.002
ARTICLE IN PRESS

132                                     K. Gawrisch et al. / Prostaglandins, Leukotrienes and Essential Fatty Acids 79 (2008) 131–134


pressure that acts on membrane imbedded proteins. It is assumed                          densities along the bilayer normal has been linked to peculiarities
that the photoisomers of rhodopsin have different shape. When an                         in the pressure profile [13,22].
integral membrane protein changes shape, it performs work                                    The distribution of saturated stearic acid (18:0) and
against the lateral pressure. As a result, the photointermediates of                     polyunsaturated DHA in the mixed chain phosphatidylcholine
rhodopsin have free energies that not only reflect the internal                           18:0–22:6n-3-PC was measured by neutron scattering [23]. Lipids
energy of the protein but also the work against lateral pressure                         were synthesized with either perdeuterated sn-1 stearic acid
from the lipid matrix [20] (Fig. 2).                                                     chains (18:0d35), or perdeuterated DHA chains (22:6n-3d11) or
   Lateral pressure varies along the bilayer normal. Pressures are                       both protonated stearic acid and DHA chains. Data were acquired
higher at the lipid–water interface where lipids tend to have                            on the advanced neutron diffractometer/reflectometer at the NIST
higher order. Differences in the pressure profile between DHA-                            Center for Neutron Research, Gaithersburg, MD. Due to the big
containing bilayers and their less unsaturated counterparts could                        differences in scattering length densities for neutrons between
explain the unique influence of DHA on rhodopsin function.                                protonated and deuterated hydrocarbon chains, it is straightfor-
Unfortunately, pressure profiles cannot be measured directly. But                         ward to calculate scattering length densities of stearic acid and
changes of order parameters of lipid hydrocarbon chains may                              DHA chains over the hydrophobic core of bilayers (see Fig. 3) [23].
serve as qualitative indicators for changes in the pressure profile                       It was observed that DHA segments are located with higher
induced by DHA [21]. Also the distribution of hydrocarbon chain                          probability near the lipid/water interface, while the segments of
                                                                                         saturated chains locate with higher probability in the bilayer
                                                                                         center.
                                                                                             The results of the neutron scattering experiments corroborated
                                                                                         earlier conclusions about an uneven distribution of polyunsatu-
                                                                                         rated chain density from 2H NMR experiments [13]. The DHA




                                                                                         Fig. 3. Scattering length density profiles of stearic acid, DHA and water in fluid
Fig. 1. Snapshots of an 18:0–22:6n-3-PC molecule in a lipid bilayer taken from a         18:0–22:6n-3-PC bilayers determined by neutron scattering measured at two
500 ps-window of a 10 ns-molecular simulation by Feller et al. [12]. The                 levels of relative humidity (86% r.h. and 66% r.h.). It is visible that DHA chain
polyunsaturated chain is shown in purple, the saturated chain in yellow and the          density tends to be higher near the lipid/water interface while stearic acid density
phosphocholine headgroup and glycerol region of the lipid in blue. The images            is higher in the bilayer center. Water forms continuous layers outside the
demonstrate the rapid structural conversions of DHA chains on the subnanosecond          hydrophobic core of lipid bilayers. DHA scattering length density is generally lower
timescale. The tendency of DHA to have higher density near the lipid water               than stearic acid density because of the lower content of deuterons in DHA (see
interface is visible as well.                                                            [23] for details).



                                                                              lateral pressure




Fig. 2. Membrane proteins sense the pressure profile of a lipid bilayer. Lipids are compressed laterally by the hydrophobic effect (red arrows). When the protein undergoes
a conformational change it performs work against membrane lateral pressure which is a contribution to free energy of protein conformers.
ARTICLE IN PRESS

                                 K. Gawrisch et al. / Prostaglandins, Leukotrienes and Essential Fatty Acids 79 (2008) 131–134                                   133


distribution causes lower order parameters near the methyl                        the aromatic amino acids phenylalanine, tyrosine, and trypto-
terminal end of the saturated hydrocarbon chains with which                       phan.
they are paired in 18:0–22:6n-3-PC [6,13,15,24]. Lower order                          Recent NMR results obtained at our lab provide some evidence
stems from the wider space that saturated chains occupy in the                    for involvement of specific interactions with DHA in rhodopsin
bilayer center.                                                                   function. In experiments on rhodopsin that was reconstituted into
    The uneven distribution of hydrocarbon chains, the low order                  membranes with variable content of phosphatidylcholine, phos-
of DHA chains, and their rapid structural conversions result in                   phatidylethanolamine, and phosphatidylserine, all with DHA
altered continuum properties of the lipid matrix. Bilayer thickness               hydrocarbon chains, it was observed that DHA chains compete
of mixed chain, DHA-containing bilayers is similar to the                         for contact with a small number of weakly specific sites on
thickness of saturated and monounsaturated lipid species with                     rhodopsin [36]. While specificity was caused by DHA, the lipid
16 to 18 carbon atoms per chain [13,25]. Consistent with the                      headgroups modulated interaction strength. Interactions were
smaller bilayer thickness, lateral area per molecule of lipids with               strongest for PE, followed by PS, and PC [36]. Monounsaturated
DHA chains is larger. The increased area could be a consequence of                lipid species have preferential contact with a different site on
the weakly polar nature of the double bonds of DHA. This may                      rhodopsin. The lifetimes of associations between lipids and
explain why polyunsaturated chains prefer to locate somewhat                      rhodopsin are short, indicating that mutual attraction has modest
closer to the lipid/water interface. It may also explain the higher               strength. According to our NMR measurements, all lipids that
permeability of polyunsaturated bilayers for water that we                        surround the protein in a first layer are replaced within
reported earlier [26].                                                            microseconds or even shorter times.
   The lateral pressure profile of 18:0–22:6n-3-PC bilayers was                        The conclusion is that rhodopsin has sites for preferential
calculated by molecular simulations [27,28]. It was observed that                 interaction with particular lipid species. Molecular simulations
the shift of DHA chain density to the lipid/water interface is                    suggest as well that the surface of rhodopsin is inhomogeneous in
correlated with the migration of lateral stresses within the bilayer              terms of lipid–rhodopsin interaction (see Fig. 4) [37]. Does
which in turn may explain the shifts in the MI/MII equilibrium                    DHA–rhodopsin interaction depend on the state of photoactiva-
[27]. Another indicator for migration of lateral stresses is                      tion of rhodopsin? To answer this question, rhodopsin was
formation of nonlamellar lipid phases. We reported earlier that                   bleached during the NMR studies. Experiments were conducted
DHA chains in phosphatidylethanolamines facilitate formation of                   at high and low pH to yield the photointermediates MI or MII,
inverted hexagonal phases [29]. Lipid monolayers of phosphati-                    respectively. Neither of those two photointermediates showed
dylethanolamines have a smaller lateral area in the headgroup                     differences in the interaction with DHA compared to dark adapted
region and lager area in the region of hydrocarbon chains. The                    rhodopsin. But the photointermediate MIII had stronger contacts
monolayers are under negative curvature elastic stress when                       with DHA [36]. Interaction of opsin with DHA was similar to dark
forced into a bilayer arrangement. Levels of stress in 18:0–22:6n-                adapted rhodopsin.
3-PE membranes are similar to 18:1n-9–18:1n-9-PE, the golden                          Specificity in lipid–rhodopsin interaction may shift lipid
standard for lipids with negative curvature stress [29]. Brown and                composition in the protein annulus compared to the bulk of the
colleagues reported that 18:1n-9–18:1n-9-PE in bilayers favors                    lipid matrix. Lipids that have higher affinity to rhodopsin will be
formation of the G-protein activation competent MII photointer-                   enriched near the protein, despite the rapid exchange of lipids.
mediate of rhodopsin [30]. Since the 18:0–22:6n-3-PE is a very                    Indeed, by NMR saturation transfer from protein to lipids, we
common lipid, in particular in neuronal membranes, it is reason-                  obtained evidence that polyunsaturated phosphatidylethanola-
able to assume that those membranes are under considerable                        mines are partially enriched near rhodopsin [36].
negative curvature elastic stress as well.                                            How may specific interactions between lipids and protein
                                                                                  influence protein function? The double bonds of polyunsaturated
                                                                                  chains could be attracted to aromatic amino acids of GPCR that
3. Specific DHA–protein interactions                                               stabilize a particular conformation of the protein. Polyunsaturated
                                                                                  hydrocarbon chains may interfere with interactions inside the
    An alternative hypothesis to explain the shifts in rhodopsin                  GPCR if the chains could reach into the protein. There is evidence
function is to assume that the free energy of rhodopsin is under                  for such events from molecular simulations [38]. Interaction with
influence from weakly specific interactions with DHA, similar to
ligand–protein interactions. In recent years, several examples of
specific interactions between proteins and polyunsaturated chains
were reported, e.g. the interaction of arachidonic acid with
prostaglandin synthase [31], the interaction of DHA with the
binding pocket of human fatty acid binding protein [32], the
interaction of the arachidonyl inhibitor with the binding pocket of
fatty acid amide hydrolase [33], the interaction of fatty acids with
the retinoic acid-related orphan receptor ß [34], and last but not
least, the interaction of retinal with rhodopsin [35].
    In all instances, binding of polyunsaturated chains to proteins
was stabilized by major contributions from polar, noncovalent
interactions like salt bridges, direct hydrogen bonding between
hydroxyl or carbonyl groups to amino acids, or indirect hydrogen
bonding via water molecules. But those interactions do not
explain selectivity to the number and location of double bounds
in the chains. The attractive pÀp interactions that may occur
between double bonds of polyunsaturated fatty acids and                           Fig. 4. Sites of rhodopsin in a 18:0–22:n-3PC/PE/cholesterol bilayer that have been
                                                                                  proposed to interact preferentially with DHA (blue) stearic acid (STEA, red) or
aromatic side chains of amino acids may be the missing link.
                                                                                  cholesterol (CHOL, purple). Sites of preferential interaction were identified in a
Indeed, it is remarkable that the fatty acid binding pockets in the               molecular dynamics simulation by Grossfield et al. [37] (copyright (2006) National
proteins that are listed above are lined by a very high density of                Academy of Sciences, U.S.A.).
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phospholipids may also interfere with hydrogen bonding and salt                           [12] S.E. Feller, K. Gawrisch, A.D. MacKerell, Polyunsaturated fatty acids in lipid
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Gawrisch Insights From Biophysical Studies On The Role Of Pufa For Function Of Gpcr

  • 1. ARTICLE IN PRESS Prostaglandins, Leukotrienes and Essential Fatty Acids 79 (2008) 131–134 Contents lists available at ScienceDirect Prostaglandins, Leukotrienes and Essential Fatty Acids journal homepage: www.elsevier.com/locate/plefa Insights from biophysical studies on the role of polyunsaturated fatty acids for function of G-protein coupled membrane receptors Klaus Gawrisch a,Ã, Olivier Soubias a, Mihaela Mihailescu b a Section of NMR, Laboratory of Membrane Biochemistry and Biophysics, NIAAA, NIH, Bethesda, MD 20892, USA b Department of Physiology and Biophysics, University of California, Irvine, CA, USA a r t i c l e in fo abstract The composition of the lipid matrix is critical for function of membrane proteins. Perhaps one of the Keywords: best studied examples is the function of the G-protein-coupled membrane receptor (GPCR) rhodopsin Docosahexaenoic acid which is located in membranes with high content of phospholipids with polyunsaturated docosahex- G-protein-coupled membrane receptor aenoic acid chains (DHA, 22:6n-3). Technological advances enabled a more detailed study of structure Rhodopsin and dynamics of DHA chains and their interaction with rhodopsin. It was established that Nuclear Magnetic Resonance polyunsaturated DHA differs from saturated and monounsaturated hydrocarbon chains by far more Neutron Scattering rapid structural conversions. Furthermore, DHA chains tend to have higher density near the lipid/water interface while density of saturated chains is higher in the bilayer center. The interface of rhodopsin has a small number of sites for tighter interaction with DHA. Polyunsaturated phosphatidylethanolamines accumulate preferentially near the protein. Surprisingly, the high conformational freedom of most DHA chains is not measurably reduced upon interaction with rhodopsin. While some observations point at an involvement of continuum elastic properties of membranes in modulation of rhodopsin function, there is growing evidence for a role of weakly specific DHA–rhodopsin interactions. & 2008 Elsevier Ltd. All rights reserved. 1. Conformation and dynamics of DHA But in the past decade our view of DHA has changed. Early molecular simulations by Rabinovitch and Ripatty [11] suggested Ever since it was established that the disks of rod outer segments that the unique electronic structure of polyunsaturated chains of the retina contain the highly unsaturated docosahexaenoic acid may permit rapid conformational changes. Recent experimental (DHA, 22:6n-3) at concentrations up to 50 mol% of all fatty acids, studies at our laboratory as well as quantum chemical calcula- speculation arose that peculiarities in DHA structure and dynamics tions and molecular dynamics simulations by our collaborators may impart unique biophysical properties on membranes that could revealed the full magnitude of conformational flexibility of DHA modulate rhodopsin function. This was confirmed by reconstitution [12,13]. High conformational flexibility of DHA chains was of rhodopsin into bilayers with varying degree of unsaturation reported by Brown and collaborators [14,15], the Davis [16], as followed by a measurement of the metarhodopsin I/metarhodopsin well as the Klein laboratory [17,18]. Our 13C MAS NMR relaxation II (MI/MII) ratio after photoactivation [1–3]. experiments have shown that DHA isomerizes on the timescale of How do membranes that are rich in DHA differ from less 1–100 ps and explore their entire conformational space within unsaturated ones? For a long time it is known that lipids in 10 ns [19]. Experimental results clearly indicate that low order in polyunsaturated membranes have low order [4–7]. Initially it was bilayers with high DHA content is a direct consequence of high proposed that low order may result from perturbations caused by conformational flexibility and of rapid structural conversions of rigidity and bulkiness of polyunsaturated hydrocarbon chains. DHA chains themselves. Quantum chemical and molecular Indeed, DHA has a unique chemical structure with six cis-locked mechanical calculations revealed that this flexibility is caused double bounds. The number of degrees of freedom of DHA chains by extremely low potential barriers for changes of dihedral bond is substantially lower which could be indicative for rigidity. angles in vinyl bonds [12]. Low potential barriers permit the Polyunsaturated chains in crystals form highly ordered, elongated polyunsaturated chains to rapidly change conformation without structures with angle-iron or helical arrangement of double bonds significant energetic penalty (Fig. 1). [8]. Such structures were also observed by molecular mechanics calculations conducted at low temperature [9,10]. 2. Nonspecific DHA–protein interactions à Corresponding author. In continuum models of lipid–protein interaction, the influence E-mail address: klausg@mail.nih.gov (K. Gawrisch). of the lipid matrix on protein function can be expressed as lateral 0952-3278/$ - see front matter & 2008 Elsevier Ltd. All rights reserved. doi:10.1016/j.plefa.2008.09.002
  • 2. ARTICLE IN PRESS 132 K. Gawrisch et al. / Prostaglandins, Leukotrienes and Essential Fatty Acids 79 (2008) 131–134 pressure that acts on membrane imbedded proteins. It is assumed densities along the bilayer normal has been linked to peculiarities that the photoisomers of rhodopsin have different shape. When an in the pressure profile [13,22]. integral membrane protein changes shape, it performs work The distribution of saturated stearic acid (18:0) and against the lateral pressure. As a result, the photointermediates of polyunsaturated DHA in the mixed chain phosphatidylcholine rhodopsin have free energies that not only reflect the internal 18:0–22:6n-3-PC was measured by neutron scattering [23]. Lipids energy of the protein but also the work against lateral pressure were synthesized with either perdeuterated sn-1 stearic acid from the lipid matrix [20] (Fig. 2). chains (18:0d35), or perdeuterated DHA chains (22:6n-3d11) or Lateral pressure varies along the bilayer normal. Pressures are both protonated stearic acid and DHA chains. Data were acquired higher at the lipid–water interface where lipids tend to have on the advanced neutron diffractometer/reflectometer at the NIST higher order. Differences in the pressure profile between DHA- Center for Neutron Research, Gaithersburg, MD. Due to the big containing bilayers and their less unsaturated counterparts could differences in scattering length densities for neutrons between explain the unique influence of DHA on rhodopsin function. protonated and deuterated hydrocarbon chains, it is straightfor- Unfortunately, pressure profiles cannot be measured directly. But ward to calculate scattering length densities of stearic acid and changes of order parameters of lipid hydrocarbon chains may DHA chains over the hydrophobic core of bilayers (see Fig. 3) [23]. serve as qualitative indicators for changes in the pressure profile It was observed that DHA segments are located with higher induced by DHA [21]. Also the distribution of hydrocarbon chain probability near the lipid/water interface, while the segments of saturated chains locate with higher probability in the bilayer center. The results of the neutron scattering experiments corroborated earlier conclusions about an uneven distribution of polyunsatu- rated chain density from 2H NMR experiments [13]. The DHA Fig. 3. Scattering length density profiles of stearic acid, DHA and water in fluid Fig. 1. Snapshots of an 18:0–22:6n-3-PC molecule in a lipid bilayer taken from a 18:0–22:6n-3-PC bilayers determined by neutron scattering measured at two 500 ps-window of a 10 ns-molecular simulation by Feller et al. [12]. The levels of relative humidity (86% r.h. and 66% r.h.). It is visible that DHA chain polyunsaturated chain is shown in purple, the saturated chain in yellow and the density tends to be higher near the lipid/water interface while stearic acid density phosphocholine headgroup and glycerol region of the lipid in blue. The images is higher in the bilayer center. Water forms continuous layers outside the demonstrate the rapid structural conversions of DHA chains on the subnanosecond hydrophobic core of lipid bilayers. DHA scattering length density is generally lower timescale. The tendency of DHA to have higher density near the lipid water than stearic acid density because of the lower content of deuterons in DHA (see interface is visible as well. [23] for details). lateral pressure Fig. 2. Membrane proteins sense the pressure profile of a lipid bilayer. Lipids are compressed laterally by the hydrophobic effect (red arrows). When the protein undergoes a conformational change it performs work against membrane lateral pressure which is a contribution to free energy of protein conformers.
  • 3. ARTICLE IN PRESS K. Gawrisch et al. / Prostaglandins, Leukotrienes and Essential Fatty Acids 79 (2008) 131–134 133 distribution causes lower order parameters near the methyl the aromatic amino acids phenylalanine, tyrosine, and trypto- terminal end of the saturated hydrocarbon chains with which phan. they are paired in 18:0–22:6n-3-PC [6,13,15,24]. Lower order Recent NMR results obtained at our lab provide some evidence stems from the wider space that saturated chains occupy in the for involvement of specific interactions with DHA in rhodopsin bilayer center. function. In experiments on rhodopsin that was reconstituted into The uneven distribution of hydrocarbon chains, the low order membranes with variable content of phosphatidylcholine, phos- of DHA chains, and their rapid structural conversions result in phatidylethanolamine, and phosphatidylserine, all with DHA altered continuum properties of the lipid matrix. Bilayer thickness hydrocarbon chains, it was observed that DHA chains compete of mixed chain, DHA-containing bilayers is similar to the for contact with a small number of weakly specific sites on thickness of saturated and monounsaturated lipid species with rhodopsin [36]. While specificity was caused by DHA, the lipid 16 to 18 carbon atoms per chain [13,25]. Consistent with the headgroups modulated interaction strength. Interactions were smaller bilayer thickness, lateral area per molecule of lipids with strongest for PE, followed by PS, and PC [36]. Monounsaturated DHA chains is larger. The increased area could be a consequence of lipid species have preferential contact with a different site on the weakly polar nature of the double bonds of DHA. This may rhodopsin. The lifetimes of associations between lipids and explain why polyunsaturated chains prefer to locate somewhat rhodopsin are short, indicating that mutual attraction has modest closer to the lipid/water interface. It may also explain the higher strength. According to our NMR measurements, all lipids that permeability of polyunsaturated bilayers for water that we surround the protein in a first layer are replaced within reported earlier [26]. microseconds or even shorter times. The lateral pressure profile of 18:0–22:6n-3-PC bilayers was The conclusion is that rhodopsin has sites for preferential calculated by molecular simulations [27,28]. It was observed that interaction with particular lipid species. Molecular simulations the shift of DHA chain density to the lipid/water interface is suggest as well that the surface of rhodopsin is inhomogeneous in correlated with the migration of lateral stresses within the bilayer terms of lipid–rhodopsin interaction (see Fig. 4) [37]. Does which in turn may explain the shifts in the MI/MII equilibrium DHA–rhodopsin interaction depend on the state of photoactiva- [27]. Another indicator for migration of lateral stresses is tion of rhodopsin? To answer this question, rhodopsin was formation of nonlamellar lipid phases. We reported earlier that bleached during the NMR studies. Experiments were conducted DHA chains in phosphatidylethanolamines facilitate formation of at high and low pH to yield the photointermediates MI or MII, inverted hexagonal phases [29]. Lipid monolayers of phosphati- respectively. Neither of those two photointermediates showed dylethanolamines have a smaller lateral area in the headgroup differences in the interaction with DHA compared to dark adapted region and lager area in the region of hydrocarbon chains. The rhodopsin. But the photointermediate MIII had stronger contacts monolayers are under negative curvature elastic stress when with DHA [36]. Interaction of opsin with DHA was similar to dark forced into a bilayer arrangement. Levels of stress in 18:0–22:6n- adapted rhodopsin. 3-PE membranes are similar to 18:1n-9–18:1n-9-PE, the golden Specificity in lipid–rhodopsin interaction may shift lipid standard for lipids with negative curvature stress [29]. Brown and composition in the protein annulus compared to the bulk of the colleagues reported that 18:1n-9–18:1n-9-PE in bilayers favors lipid matrix. Lipids that have higher affinity to rhodopsin will be formation of the G-protein activation competent MII photointer- enriched near the protein, despite the rapid exchange of lipids. mediate of rhodopsin [30]. Since the 18:0–22:6n-3-PE is a very Indeed, by NMR saturation transfer from protein to lipids, we common lipid, in particular in neuronal membranes, it is reason- obtained evidence that polyunsaturated phosphatidylethanola- able to assume that those membranes are under considerable mines are partially enriched near rhodopsin [36]. negative curvature elastic stress as well. How may specific interactions between lipids and protein influence protein function? The double bonds of polyunsaturated chains could be attracted to aromatic amino acids of GPCR that 3. Specific DHA–protein interactions stabilize a particular conformation of the protein. Polyunsaturated hydrocarbon chains may interfere with interactions inside the An alternative hypothesis to explain the shifts in rhodopsin GPCR if the chains could reach into the protein. There is evidence function is to assume that the free energy of rhodopsin is under for such events from molecular simulations [38]. Interaction with influence from weakly specific interactions with DHA, similar to ligand–protein interactions. In recent years, several examples of specific interactions between proteins and polyunsaturated chains were reported, e.g. the interaction of arachidonic acid with prostaglandin synthase [31], the interaction of DHA with the binding pocket of human fatty acid binding protein [32], the interaction of the arachidonyl inhibitor with the binding pocket of fatty acid amide hydrolase [33], the interaction of fatty acids with the retinoic acid-related orphan receptor ß [34], and last but not least, the interaction of retinal with rhodopsin [35]. In all instances, binding of polyunsaturated chains to proteins was stabilized by major contributions from polar, noncovalent interactions like salt bridges, direct hydrogen bonding between hydroxyl or carbonyl groups to amino acids, or indirect hydrogen bonding via water molecules. But those interactions do not explain selectivity to the number and location of double bounds in the chains. The attractive pÀp interactions that may occur between double bonds of polyunsaturated fatty acids and Fig. 4. Sites of rhodopsin in a 18:0–22:n-3PC/PE/cholesterol bilayer that have been proposed to interact preferentially with DHA (blue) stearic acid (STEA, red) or aromatic side chains of amino acids may be the missing link. cholesterol (CHOL, purple). Sites of preferential interaction were identified in a Indeed, it is remarkable that the fatty acid binding pockets in the molecular dynamics simulation by Grossfield et al. [37] (copyright (2006) National proteins that are listed above are lined by a very high density of Academy of Sciences, U.S.A.).
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