Soumettre la recherche
Mettre en ligne
Network medicine - Integrating drugs, targets, diseases and side-effects
•
Télécharger en tant que PPT, PDF
•
3 j'aime
•
404 vues
Lars Juhl Jensen
Suivre
LEO Pharma, Ballerup, Denmark, November 5, 2008
Lire moins
Lire la suite
Santé & Médecine
Technologie
Signaler
Partager
Signaler
Partager
1 sur 115
Télécharger maintenant
Recommandé
Using side effects for drug target identification
Using side effects for drug target identification
Lars Juhl Jensen
Text and data mining
Text and data mining
Lars Juhl Jensen
The Gnome's Guide to Data Integration
The Gnome's Guide to Data Integration
Lars Juhl Jensen
Making the best of a bad situation: Using side effects to reveal new targets ...
Making the best of a bad situation: Using side effects to reveal new targets ...
Lars Juhl Jensen
STRING - Cross-species integration of known and predicted protein-protein int...
STRING - Cross-species integration of known and predicted protein-protein int...
Lars Juhl Jensen
Personalized models for Quantitative Systems Pharmacology
Personalized models for Quantitative Systems Pharmacology
Rutgers University
tarGET iD
tarGET iD
Jan Vomacka
59832462
59832462
Gerifalte Ns
Recommandé
Using side effects for drug target identification
Using side effects for drug target identification
Lars Juhl Jensen
Text and data mining
Text and data mining
Lars Juhl Jensen
The Gnome's Guide to Data Integration
The Gnome's Guide to Data Integration
Lars Juhl Jensen
Making the best of a bad situation: Using side effects to reveal new targets ...
Making the best of a bad situation: Using side effects to reveal new targets ...
Lars Juhl Jensen
STRING - Cross-species integration of known and predicted protein-protein int...
STRING - Cross-species integration of known and predicted protein-protein int...
Lars Juhl Jensen
Personalized models for Quantitative Systems Pharmacology
Personalized models for Quantitative Systems Pharmacology
Rutgers University
tarGET iD
tarGET iD
Jan Vomacka
59832462
59832462
Gerifalte Ns
Computational Biology - Signaling networks and drug repositioning
Computational Biology - Signaling networks and drug repositioning
Lars Juhl Jensen
Network biology: Large-scale biomedical data and text mining
Network biology: Large-scale biomedical data and text mining
Lars Juhl Jensen
Network biology - A basis for large-scale biomedica data mining
Network biology - A basis for large-scale biomedica data mining
Lars Juhl Jensen
Data integration: The STITCH database of protein-small molecule interactions
Data integration: The STITCH database of protein-small molecule interactions
Lars Juhl Jensen
Large-scale integration of data and text
Large-scale integration of data and text
Lars Juhl Jensen
Large-scale biomedical data and text integration
Large-scale biomedical data and text integration
Lars Juhl Jensen
Integration of heterogeneous data
Integration of heterogeneous data
Lars Juhl Jensen
Prediction of protein-small molecule networks through large-scale data integr...
Prediction of protein-small molecule networks through large-scale data integr...
Lars Juhl Jensen
Network biology: A basis for large-scale biomedical data mining
Network biology: A basis for large-scale biomedical data mining
Lars Juhl Jensen
Network biology: A basis for large-scale biomedical data mining
Network biology: A basis for large-scale biomedical data mining
Lars Juhl Jensen
Network biology: A basis for large-scale biomedical data mining
Network biology: A basis for large-scale biomedical data mining
Lars Juhl Jensen
Networks of proteins and diseases
Networks of proteins and diseases
Lars Juhl Jensen
Data Integration and Systems Biology
Data Integration and Systems Biology
Lars Juhl Jensen
Networks of proteins and diseases
Networks of proteins and diseases
Lars Juhl Jensen
Cellular Network Biology
Cellular Network Biology
Lars Juhl Jensen
Data and Text Mining
Data and Text Mining
Lars Juhl Jensen
Data integration: The STITCH database of protein–small molecule interactions
Data integration: The STITCH database of protein–small molecule interactions
Lars Juhl Jensen
Large-scale integration of data and text
Large-scale integration of data and text
Lars Juhl Jensen
Large-scale integration of data and text
Large-scale integration of data and text
Lars Juhl Jensen
Unraveling signaling networks by data integration
Unraveling signaling networks by data integration
Lars Juhl Jensen
One tagger, many uses: Illustrating the power of dictionary-based named entit...
One tagger, many uses: Illustrating the power of dictionary-based named entit...
Lars Juhl Jensen
One tagger, many uses: Simple text-mining strategies for biomedicine
One tagger, many uses: Simple text-mining strategies for biomedicine
Lars Juhl Jensen
Contenu connexe
Similaire à Network medicine - Integrating drugs, targets, diseases and side-effects
Computational Biology - Signaling networks and drug repositioning
Computational Biology - Signaling networks and drug repositioning
Lars Juhl Jensen
Network biology: Large-scale biomedical data and text mining
Network biology: Large-scale biomedical data and text mining
Lars Juhl Jensen
Network biology - A basis for large-scale biomedica data mining
Network biology - A basis for large-scale biomedica data mining
Lars Juhl Jensen
Data integration: The STITCH database of protein-small molecule interactions
Data integration: The STITCH database of protein-small molecule interactions
Lars Juhl Jensen
Large-scale integration of data and text
Large-scale integration of data and text
Lars Juhl Jensen
Large-scale biomedical data and text integration
Large-scale biomedical data and text integration
Lars Juhl Jensen
Integration of heterogeneous data
Integration of heterogeneous data
Lars Juhl Jensen
Prediction of protein-small molecule networks through large-scale data integr...
Prediction of protein-small molecule networks through large-scale data integr...
Lars Juhl Jensen
Network biology: A basis for large-scale biomedical data mining
Network biology: A basis for large-scale biomedical data mining
Lars Juhl Jensen
Network biology: A basis for large-scale biomedical data mining
Network biology: A basis for large-scale biomedical data mining
Lars Juhl Jensen
Network biology: A basis for large-scale biomedical data mining
Network biology: A basis for large-scale biomedical data mining
Lars Juhl Jensen
Networks of proteins and diseases
Networks of proteins and diseases
Lars Juhl Jensen
Data Integration and Systems Biology
Data Integration and Systems Biology
Lars Juhl Jensen
Networks of proteins and diseases
Networks of proteins and diseases
Lars Juhl Jensen
Cellular Network Biology
Cellular Network Biology
Lars Juhl Jensen
Data and Text Mining
Data and Text Mining
Lars Juhl Jensen
Data integration: The STITCH database of protein–small molecule interactions
Data integration: The STITCH database of protein–small molecule interactions
Lars Juhl Jensen
Large-scale integration of data and text
Large-scale integration of data and text
Lars Juhl Jensen
Large-scale integration of data and text
Large-scale integration of data and text
Lars Juhl Jensen
Unraveling signaling networks by data integration
Unraveling signaling networks by data integration
Lars Juhl Jensen
Similaire à Network medicine - Integrating drugs, targets, diseases and side-effects
(20)
Computational Biology - Signaling networks and drug repositioning
Computational Biology - Signaling networks and drug repositioning
Network biology: Large-scale biomedical data and text mining
Network biology: Large-scale biomedical data and text mining
Network biology - A basis for large-scale biomedica data mining
Network biology - A basis for large-scale biomedica data mining
Data integration: The STITCH database of protein-small molecule interactions
Data integration: The STITCH database of protein-small molecule interactions
Large-scale integration of data and text
Large-scale integration of data and text
Large-scale biomedical data and text integration
Large-scale biomedical data and text integration
Integration of heterogeneous data
Integration of heterogeneous data
Prediction of protein-small molecule networks through large-scale data integr...
Prediction of protein-small molecule networks through large-scale data integr...
Network biology: A basis for large-scale biomedical data mining
Network biology: A basis for large-scale biomedical data mining
Network biology: A basis for large-scale biomedical data mining
Network biology: A basis for large-scale biomedical data mining
Network biology: A basis for large-scale biomedical data mining
Network biology: A basis for large-scale biomedical data mining
Networks of proteins and diseases
Networks of proteins and diseases
Data Integration and Systems Biology
Data Integration and Systems Biology
Networks of proteins and diseases
Networks of proteins and diseases
Cellular Network Biology
Cellular Network Biology
Data and Text Mining
Data and Text Mining
Data integration: The STITCH database of protein–small molecule interactions
Data integration: The STITCH database of protein–small molecule interactions
Large-scale integration of data and text
Large-scale integration of data and text
Large-scale integration of data and text
Large-scale integration of data and text
Unraveling signaling networks by data integration
Unraveling signaling networks by data integration
Plus de Lars Juhl Jensen
One tagger, many uses: Illustrating the power of dictionary-based named entit...
One tagger, many uses: Illustrating the power of dictionary-based named entit...
Lars Juhl Jensen
One tagger, many uses: Simple text-mining strategies for biomedicine
One tagger, many uses: Simple text-mining strategies for biomedicine
Lars Juhl Jensen
Extract 2.0: Text-mining-assisted interactive annotation
Extract 2.0: Text-mining-assisted interactive annotation
Lars Juhl Jensen
Network visualization: A crash course on using Cytoscape
Network visualization: A crash course on using Cytoscape
Lars Juhl Jensen
STRING & STITCH: Network integration of heterogeneous data
STRING & STITCH: Network integration of heterogeneous data
Lars Juhl Jensen
Biomedical text mining: Automatic processing of unstructured text
Biomedical text mining: Automatic processing of unstructured text
Lars Juhl Jensen
Medical network analysis: Linking diseases and genes through data and text mi...
Medical network analysis: Linking diseases and genes through data and text mi...
Lars Juhl Jensen
Network Biology: A crash course on STRING and Cytoscape
Network Biology: A crash course on STRING and Cytoscape
Lars Juhl Jensen
Cellular networks
Cellular networks
Lars Juhl Jensen
Cellular Network Biology: Large-scale integration of data and text
Cellular Network Biology: Large-scale integration of data and text
Lars Juhl Jensen
Statistics on big biomedical data: Methods and pitfalls when analyzing high-t...
Statistics on big biomedical data: Methods and pitfalls when analyzing high-t...
Lars Juhl Jensen
STRING & related databases: Large-scale integration of heterogeneous data
STRING & related databases: Large-scale integration of heterogeneous data
Lars Juhl Jensen
Tagger: Rapid dictionary-based named entity recognition
Tagger: Rapid dictionary-based named entity recognition
Lars Juhl Jensen
Network Biology: Large-scale integration of data and text
Network Biology: Large-scale integration of data and text
Lars Juhl Jensen
Medical text mining: Linking diseases, drugs, and adverse reactions
Medical text mining: Linking diseases, drugs, and adverse reactions
Lars Juhl Jensen
Network biology: Large-scale integration of data and text
Network biology: Large-scale integration of data and text
Lars Juhl Jensen
Medical data and text mining: Linking diseases, drugs, and adverse reactions
Medical data and text mining: Linking diseases, drugs, and adverse reactions
Lars Juhl Jensen
Network biology: Large-scale integration of data and text
Network biology: Large-scale integration of data and text
Lars Juhl Jensen
Biomarker bioinformatics: Network-based candidate prioritization
Biomarker bioinformatics: Network-based candidate prioritization
Lars Juhl Jensen
The Art of Counting: Scoring and ranking co-occurrences in literature
The Art of Counting: Scoring and ranking co-occurrences in literature
Lars Juhl Jensen
Plus de Lars Juhl Jensen
(20)
One tagger, many uses: Illustrating the power of dictionary-based named entit...
One tagger, many uses: Illustrating the power of dictionary-based named entit...
One tagger, many uses: Simple text-mining strategies for biomedicine
One tagger, many uses: Simple text-mining strategies for biomedicine
Extract 2.0: Text-mining-assisted interactive annotation
Extract 2.0: Text-mining-assisted interactive annotation
Network visualization: A crash course on using Cytoscape
Network visualization: A crash course on using Cytoscape
STRING & STITCH: Network integration of heterogeneous data
STRING & STITCH: Network integration of heterogeneous data
Biomedical text mining: Automatic processing of unstructured text
Biomedical text mining: Automatic processing of unstructured text
Medical network analysis: Linking diseases and genes through data and text mi...
Medical network analysis: Linking diseases and genes through data and text mi...
Network Biology: A crash course on STRING and Cytoscape
Network Biology: A crash course on STRING and Cytoscape
Cellular networks
Cellular networks
Cellular Network Biology: Large-scale integration of data and text
Cellular Network Biology: Large-scale integration of data and text
Statistics on big biomedical data: Methods and pitfalls when analyzing high-t...
Statistics on big biomedical data: Methods and pitfalls when analyzing high-t...
STRING & related databases: Large-scale integration of heterogeneous data
STRING & related databases: Large-scale integration of heterogeneous data
Tagger: Rapid dictionary-based named entity recognition
Tagger: Rapid dictionary-based named entity recognition
Network Biology: Large-scale integration of data and text
Network Biology: Large-scale integration of data and text
Medical text mining: Linking diseases, drugs, and adverse reactions
Medical text mining: Linking diseases, drugs, and adverse reactions
Network biology: Large-scale integration of data and text
Network biology: Large-scale integration of data and text
Medical data and text mining: Linking diseases, drugs, and adverse reactions
Medical data and text mining: Linking diseases, drugs, and adverse reactions
Network biology: Large-scale integration of data and text
Network biology: Large-scale integration of data and text
Biomarker bioinformatics: Network-based candidate prioritization
Biomarker bioinformatics: Network-based candidate prioritization
The Art of Counting: Scoring and ranking co-occurrences in literature
The Art of Counting: Scoring and ranking co-occurrences in literature
Dernier
Lucknow Call girls - 8800925952 - 24x7 service with hotel room
Lucknow Call girls - 8800925952 - 24x7 service with hotel room
discovermytutordmt
💎VVIP Kolkata Call Girls Parganas🩱7001035870🩱Independent Girl ( Ac Rooms Avai...
💎VVIP Kolkata Call Girls Parganas🩱7001035870🩱Independent Girl ( Ac Rooms Avai...
Taniya Sharma
Kesar Bagh Call Girl Price 9548273370 , Lucknow Call Girls Service
Kesar Bagh Call Girl Price 9548273370 , Lucknow Call Girls Service
makika9823
(Rocky) Jaipur Call Girl - 9521753030 Escorts Service 50% Off with Cash ON De...
(Rocky) Jaipur Call Girl - 9521753030 Escorts Service 50% Off with Cash ON De...
indiancallgirl4rent
Call Girls Nagpur Just Call 9907093804 Top Class Call Girl Service Available
Call Girls Nagpur Just Call 9907093804 Top Class Call Girl Service Available
Dipal Arora
Low Rate Call Girls Kochi Anika 8250192130 Independent Escort Service Kochi
Low Rate Call Girls Kochi Anika 8250192130 Independent Escort Service Kochi
Suhani Kapoor
Chandrapur Call girls 8617370543 Provides all area service COD available
Chandrapur Call girls 8617370543 Provides all area service COD available
Dipal Arora
Bangalore Call Girls Nelamangala Number 7001035870 Meetin With Bangalore Esc...
Bangalore Call Girls Nelamangala Number 7001035870 Meetin With Bangalore Esc...
narwatsonia7
(👑VVIP ISHAAN ) Russian Call Girls Service Navi Mumbai🖕9920874524🖕Independent...
(👑VVIP ISHAAN ) Russian Call Girls Service Navi Mumbai🖕9920874524🖕Independent...
Taniya Sharma
Call Girl Coimbatore Prisha☎️ 8250192130 Independent Escort Service Coimbatore
Call Girl Coimbatore Prisha☎️ 8250192130 Independent Escort Service Coimbatore
narwatsonia7
Call Girls Horamavu WhatsApp Number 7001035870 Meeting With Bangalore Escorts
Call Girls Horamavu WhatsApp Number 7001035870 Meeting With Bangalore Escorts
vidya singh
Call Girls Aurangabad Just Call 9907093804 Top Class Call Girl Service Available
Call Girls Aurangabad Just Call 9907093804 Top Class Call Girl Service Available
Dipal Arora
All Time Service Available Call Girls Marine Drive 📳 9820252231 For 18+ VIP C...
All Time Service Available Call Girls Marine Drive 📳 9820252231 For 18+ VIP C...
Arohi Goyal
Escort Service Call Girls In Sarita Vihar,, 99530°56974 Delhi NCR
Escort Service Call Girls In Sarita Vihar,, 99530°56974 Delhi NCR
9953056974 Low Rate Call Girls In Saket, Delhi NCR
Bangalore Call Girl Whatsapp Number 100% Complete Your Sexual Needs
Bangalore Call Girl Whatsapp Number 100% Complete Your Sexual Needs
Gfnyt
Call Girls Kochi Just Call 9907093804 Top Class Call Girl Service Available
Call Girls Kochi Just Call 9907093804 Top Class Call Girl Service Available
Dipal Arora
Call Girls Cuttack Just Call 9907093804 Top Class Call Girl Service Available
Call Girls Cuttack Just Call 9907093804 Top Class Call Girl Service Available
Dipal Arora
♛VVIP Hyderabad Call Girls Chintalkunta🖕7001035870🖕Riya Kappor Top Call Girl ...
♛VVIP Hyderabad Call Girls Chintalkunta🖕7001035870🖕Riya Kappor Top Call Girl ...
astropune
Russian Call Girls in Delhi Tanvi ➡️ 9711199012 💋📞 Independent Escort Service...
Russian Call Girls in Delhi Tanvi ➡️ 9711199012 💋📞 Independent Escort Service...
Call Girls In Delhi Whatsup 9873940964 Enjoy Unlimited Pleasure
VIP Service Call Girls Sindhi Colony 📳 7877925207 For 18+ VIP Call Girl At Th...
VIP Service Call Girls Sindhi Colony 📳 7877925207 For 18+ VIP Call Girl At Th...
jageshsingh5554
Dernier
(20)
Lucknow Call girls - 8800925952 - 24x7 service with hotel room
Lucknow Call girls - 8800925952 - 24x7 service with hotel room
💎VVIP Kolkata Call Girls Parganas🩱7001035870🩱Independent Girl ( Ac Rooms Avai...
💎VVIP Kolkata Call Girls Parganas🩱7001035870🩱Independent Girl ( Ac Rooms Avai...
Kesar Bagh Call Girl Price 9548273370 , Lucknow Call Girls Service
Kesar Bagh Call Girl Price 9548273370 , Lucknow Call Girls Service
(Rocky) Jaipur Call Girl - 9521753030 Escorts Service 50% Off with Cash ON De...
(Rocky) Jaipur Call Girl - 9521753030 Escorts Service 50% Off with Cash ON De...
Call Girls Nagpur Just Call 9907093804 Top Class Call Girl Service Available
Call Girls Nagpur Just Call 9907093804 Top Class Call Girl Service Available
Low Rate Call Girls Kochi Anika 8250192130 Independent Escort Service Kochi
Low Rate Call Girls Kochi Anika 8250192130 Independent Escort Service Kochi
Chandrapur Call girls 8617370543 Provides all area service COD available
Chandrapur Call girls 8617370543 Provides all area service COD available
Bangalore Call Girls Nelamangala Number 7001035870 Meetin With Bangalore Esc...
Bangalore Call Girls Nelamangala Number 7001035870 Meetin With Bangalore Esc...
(👑VVIP ISHAAN ) Russian Call Girls Service Navi Mumbai🖕9920874524🖕Independent...
(👑VVIP ISHAAN ) Russian Call Girls Service Navi Mumbai🖕9920874524🖕Independent...
Call Girl Coimbatore Prisha☎️ 8250192130 Independent Escort Service Coimbatore
Call Girl Coimbatore Prisha☎️ 8250192130 Independent Escort Service Coimbatore
Call Girls Horamavu WhatsApp Number 7001035870 Meeting With Bangalore Escorts
Call Girls Horamavu WhatsApp Number 7001035870 Meeting With Bangalore Escorts
Call Girls Aurangabad Just Call 9907093804 Top Class Call Girl Service Available
Call Girls Aurangabad Just Call 9907093804 Top Class Call Girl Service Available
All Time Service Available Call Girls Marine Drive 📳 9820252231 For 18+ VIP C...
All Time Service Available Call Girls Marine Drive 📳 9820252231 For 18+ VIP C...
Escort Service Call Girls In Sarita Vihar,, 99530°56974 Delhi NCR
Escort Service Call Girls In Sarita Vihar,, 99530°56974 Delhi NCR
Bangalore Call Girl Whatsapp Number 100% Complete Your Sexual Needs
Bangalore Call Girl Whatsapp Number 100% Complete Your Sexual Needs
Call Girls Kochi Just Call 9907093804 Top Class Call Girl Service Available
Call Girls Kochi Just Call 9907093804 Top Class Call Girl Service Available
Call Girls Cuttack Just Call 9907093804 Top Class Call Girl Service Available
Call Girls Cuttack Just Call 9907093804 Top Class Call Girl Service Available
♛VVIP Hyderabad Call Girls Chintalkunta🖕7001035870🖕Riya Kappor Top Call Girl ...
♛VVIP Hyderabad Call Girls Chintalkunta🖕7001035870🖕Riya Kappor Top Call Girl ...
Russian Call Girls in Delhi Tanvi ➡️ 9711199012 💋📞 Independent Escort Service...
Russian Call Girls in Delhi Tanvi ➡️ 9711199012 💋📞 Independent Escort Service...
VIP Service Call Girls Sindhi Colony 📳 7877925207 For 18+ VIP Call Girl At Th...
VIP Service Call Girls Sindhi Colony 📳 7877925207 For 18+ VIP Call Girl At Th...
Network medicine - Integrating drugs, targets, diseases and side-effects
1.
Lars Juhl Jensen
Network medicine Integrating drugs, targets, diseases and side-effects
2.
Lars Juhl Jensen
Network medicine Integrating drugs, targets, diseases and side-effects
3.
Lars Juhl Jensen
Network medicine Integrating drugs, targets, diseases and side-effects
4.
5.
6.
what went wrong?
7.
phase 0
8.
before you do
anything
9.
a good problem
10.
a good idea
11.
dynamics of complexes
12.
microarray data
13.
protein interactions
14.
de Lichtenberg, Jensen,
et al., Science , 2005
15.
phosphorylation networks
16.
mass spectrometry data
17.
sequence motifs
18.
functional associations
19.
Linding, Jensen, Ostheimer
et al., Cell , 2007
20.
Linding, Jensen, Ostheimer
et al., Cell , 2007
21.
the problem
22.
new uses for
old drugs
23.
drug–drug network
24.
shared target(s)
25.
chemical similarity
26.
Tanimoto coefficients
27.
28.
29.
similar drugs share
targets
30.
only trivial predictions
31.
the idea
32.
chemical perturbations
33.
phenotypic readouts
34.
drug treatment
35.
side effects
36.
the implementation
37.
information on side
effects
38.
package inserts
39.
40.
text mining
41.
side-effect ontology
42.
backtracking
43.
44.
side-effect correlations
45.
46.
GSC weighting
47.
side-effect frequencies
48.
49.
raw similarity score
50.
51.
p-values
52.
53.
side-effect similarity
54.
chemical similarity
55.
56.
reference set
57.
drug–target pairs
58.
59.
drug–drug pairs
60.
score bins
61.
benchmark
62.
63.
fit calibration function
64.
65.
probabilistic scores
66.
the results
67.
drug–drug network
68.
ATC codes
69.
70.
categorization
71.
72.
73.
74.
map onto score
space
75.
76.
the experiments
77.
20 drug–drug relations
78.
in vitro
binding assays
79.
80.
81.
82.
K i <10
µM for 11 of 20
83.
cell assays
84.
9 of 9
showed activity
85.
86.
the big picture
87.
STITCH
88.
89.
protein–chemical network
90.
91.
primary experimental data
92.
activity screens
93.
Fedorov et al.,
PNAS , 2007
94.
protein interactions
95.
Jensen & Bork,
Science , 2008
96.
gene coexpression
97.
98.
genomic context
99.
Korbel et al.,
Nature Biotechnology , 2004
100.
literature mining
101.
102.
curated knowledge
103.
Letunic & Bork,
Trends in Biochemical Sciences , 2008
104.
different formats
105.
different identifiers
106.
different reliability
107.
benchmarking
108.
von Mering et
al., Nucleic Acids Research , 2005
109.
373 genomes
110.
Jensen et al.,
Nucleic Acids Research , 2008
111.
transfer by orthology
112.
combine all evidence
113.
114.
115.
http://larsjuhljensen.wordpress.com
Télécharger maintenant