Personal Information
Entreprise/Lieu de travail
Barcelona Area, Spain Spain
Profession
NGS data analysis Coordinator at Centre for Genomic Regulation (CRG)
Secteur d’activité
Medical / Health Care / Pharmaceuticals
À propos
Bioinformatician expert of Next Generation Sequencing data analysis (PhD). Currently working at Centre for Genomic Regulation in Barcelona, Spain, as NGS data analysis coordinator in the Bioinformatics Core Facility. My work includes to supervise projects about a broad variety of NGS application such as assembly and annotation of genomic and transcriptomic data (mRNAseq and microRNAseq), detection of interaction protein/DNA and protein/RNA (chip-seq and clip-seq), metagenomic analysis. I'm also involved in pathway analysis, gene-set enrichment and motif detection. I participated in more than 60 different projects and in 3 international genome projects (melon, bean and lynx) being part of ...
Mots-clés
bioinformatics
ngs
nextflow
chipseq
linux containers
singularity
docker
assembly
dna vectors
qc
data format
reproducible science
science
metagenomics
microbes
16s
semantic wiki
genome project
annotation
annowiki
macs
secondary structure
non-coding rnas
covariance
Tout plus
Présentations
(5)Documents
(2)Personal Information
Entreprise/Lieu de travail
Barcelona Area, Spain Spain
Profession
NGS data analysis Coordinator at Centre for Genomic Regulation (CRG)
Secteur d’activité
Medical / Health Care / Pharmaceuticals
À propos
Bioinformatician expert of Next Generation Sequencing data analysis (PhD). Currently working at Centre for Genomic Regulation in Barcelona, Spain, as NGS data analysis coordinator in the Bioinformatics Core Facility. My work includes to supervise projects about a broad variety of NGS application such as assembly and annotation of genomic and transcriptomic data (mRNAseq and microRNAseq), detection of interaction protein/DNA and protein/RNA (chip-seq and clip-seq), metagenomic analysis. I'm also involved in pathway analysis, gene-set enrichment and motif detection. I participated in more than 60 different projects and in 3 international genome projects (melon, bean and lynx) being part of ...
Mots-clés
bioinformatics
ngs
nextflow
chipseq
linux containers
singularity
docker
assembly
dna vectors
qc
data format
reproducible science
science
metagenomics
microbes
16s
semantic wiki
genome project
annotation
annowiki
macs
secondary structure
non-coding rnas
covariance
Tout plus