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Biochemistry Spotters

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             Biochemistry for Medics
             www.namrata.co


10/28/2012                        Biochemistry For Medics   1
Make a Diagnosis
        A 29 year- old officer presented to emergency department
       complaining of chills and breathing difficulty.
        He was a heroin abuser who was admitted in the same
       hospital 7 years ago because of drug over dosage.
        He had lost 10 kg of body weight since his last clinical
       visit.
        On examination, he had multiple enlarged lymph nodes.
       Several red nodules were present on the skin of chest and
       arms.
       The chest radiograph showed diffuse pneumonia.
        Sputum smear revealed numerous Pneumocystis
       organisms.
       Skin biopsy revealed Kaposi’s sarcoma as shown in the
       picture


10/28/2012                  Biochemistry For Medics                 2
Diagnosis




             This is a case of HIV infection. History of drug
             abuse, weight loss, typical presence of
             lymphadenopathy and AIDS markers- Kaposi
             sarcoma and Pneumocystis pneumonia signify HIV
             infection.
10/28/2012                     Biochemistry For Medics          3
Identify the structure and mention any
        two of its important uses




10/28/2012             Biochemistry For Medics   4
Answer




             It is Liposome, used for-
             1) Drug delivery and
10/28/2012
             2) Gene therapyBiochemistry For Medics   5
Identify the Protein and mention any two of its
                     important functions




10/28/2012              Biochemistry For Medics          6
Answer
          It is a structure of collagen.
          Collagen is rich in glycine,
         proline and hydroxy proline
         amino acids as shown in the
         figure.
          It is mostly found in tendons,
         ligaments and skin, and is also
         abundant in cornea, cartilage,
         bone, blood vessels, the gut, and
         intervertebral disc.
          The fibroblast is the most
         common cell which creates
         collagen.



10/28/2012                     Biochemistry For Medics   7
Make a Diagnosis

     A 16-year-old African American girl was admitted
     to the emergency room with complaints of fever
     and recurrent pain in her arms and legs
     Her laboratory tests revealed the following:

     Hemoglobin      8.0 g/dl
     Haemtocrit      9.1%
     Serum Iron- 11μg/dl
     Serum Albumin 4.4g/dl



10/28/2012              Biochemistry For Medics         8
Make a Diagnosis




             Blood Smear showed target cells, poikilocytes,
             hypochromasia, sickle red cells, nucleated RBCs, and Howell-
             Jolly bodies
             Hb Electrophoresis -showed a slow moving band.
             What is the most probable diagnosis?

10/28/2012                        Biochemistry For Medics                   9
Answer
        The patient is suffering from sickle cell anemia
        The Sickle cell disease, also called as sickle cell
        anemia is due to a single nucleotide alteration
        (point mutation) in the β globin gene of
        hemoglobin resulting in rigid misshapen
        erythrocytes- sickle shaped erythrocytes.
        Such sickled cells frequently block the flow of
        blood in the narrow capillaries. The interruption in
        the supply of oxygen leads to tissue anoxia, causing
        pain and eventually death of cells (infarction) in the
        vicinity of blockage.

10/28/2012                 Biochemistry For Medics               10
Make a Diagnosis

   A 12 –year-old girl has been brought by her
   parents for consultation. She has pale skin,
   blonde hair and pink iris. She is otherwise
   healthy, but is unable to fix the gaze.
   Parents reveal that their first two children,
   a boy and a girl, had similar symptoms, but
   the parents themselves are normal.
   What is the most probable diagnosis?


10/28/2012            Biochemistry For Medics      11
Make a Diagnosis




    Normal parents having two affected children, male and female, is
    suggestive of Autosomal recessive inheritance of oculo-cutaneous
    albinism. The baby has defect in the synthesis of melanin . Pale skin,
    blonde hair and pink color of iris, are all due to the absence of
    melanin. The visual impairment is also typical of albinism.
10/28/2012                       Biochemistry For Medics                     12
Make a Diagnosis




      A 3-year-old child has been brought to the clinic because of
      excessive exhaustion and fatigue. On further questioning of the
      mother, she reports that she was previously breastfeeding but
      had to stop to return to work. To feed all of her other children,
      she had to dilute her formula with water to make the formula
      last longer for the entire family.
10/28/2012                     Biochemistry For Medics                    13
Make a Diagnosis
      The child is irritable, has starved appearance, weight is
      much below for height, mid-arm muscle circumference
      is 12 cm and triceps thickness is 2mm.
      The creatinine-height index (the 24-h urinary creatinine
      excretion compared with normal values based on
      height) is low but serum Albumin is normal.




10/28/2012                  Biochemistry For Medics               14
Answer
             The child is suffering from Nutritional Marasmus.
              Marasmus is a state in which virtually all available
             body fat stores are exhausted due to starvation.
             The given patient has starved appearance diagnostic
             of Marasmus.
             The low body weight, diminished skin-fold thickness
             and reduced arm muscle circumference reflect the loss
             of fat reserves and the catabolism of proteins
             throughout the body.
              The low creatinine-height index also reflects the loss
             of muscle mass while the normal serum albumin
             differentiates it from Kwashiorkor which is primarily
             due to protein deficiency.


10/28/2012                      Biochemistry For Medics                 15
Spot Question
             A 60- year- old woman presents with chest pain
             radiating to her left arm. She is diagnosed with having
             had a myocardial infarct and is prescribed a statin
             medication. Statin is known as a Hypolipidemic drug.
             What is the mechanism of action of this drug ?




10/28/2012                      Biochemistry For Medics                16
Answer
       The Statins act as competitive inhibitors of the
       enzyme HMG-CoA reductase, the rate limiting
       enzyme of the pathway of cholesterol
       biosynthesis.

       Lovastatin is a member of a class of drugs
       (Atorvastatin, fluvastatin, pravastatin and
       Simvastatin are others in this class) called statins
       that are used to treat hypercholesterolemia.




10/28/2012                  Biochemistry For Medics           17
Make a diagnosis

              An 11-year-old girl has been brought by her
             parents to the accident & emergency
             department in a confused state with
             symptoms of acute abdomen, respiratory
             difficulty & acetone-like smell of breath. She
             is a known case of Type 1 Diabetes Mellitus
             but is non compliant to insulin therapy.
             What is the likely diagnosis?
              What is the expected outcome of urine
             analysis ?

10/28/2012                  Biochemistry For Medics       18
Answer




        The girl is suffering from Diabetic ketoacidosis, the
        most frequent complication of Type 1 DM.
        Urine analysis is expected to reveal the presence of
        glucose and ketone bodies while blood biochemistry
        would reveal, hyperglycemia, metabolic acidosis, and
        volume depletion due to osmotic diuresis.
10/28/2012                  Biochemistry For Medics             19
Spot Question




           The above Line weaver-Burk plot shows the mechanism of action of a
           drug used for the treatment of gout. The said drug acts by inhibiting
           xanthine oxidase enzyme.
           Which type of inhibition is shown in the graph?
           Name a similarly acting drug used for the treatment of
10/28/2012
           hypertension.                                 Biochemistry For Medics 20
Answer




         Since the Km has increased and Vmax is constant , it is
         competitive inhibition. Allopurinol acts by inhibiting Xanthine
         oxidase enzyme.
          Captopril, an antihypertensive drug acts similarly to
         competitively inhibit, Angiotensin Converting Enzyme (ACE).
10/28/2012                      Biochemistry For Medics                    21
Make a diagnosis

        A 24- year- old patient was brought to
        medical OPD with acute abdominal pain,
        depression and extreme weakness.
        Urine analysis revealed purple color and
        the presence of ALA and PBG (Delta amino
        Levulinic acid and Porphobilinogen).
        What is the probable diagnosis and defect
        in this disease ?

10/28/2012             Biochemistry For Medics      22
Answer
             It is a case of Acute
             intermittent Porphyria.
              Purple colored urine,
             presence of ALA (Delta
             amino levuliinic acid) and
             PBG (Porphobilinogen)
             and
              Psychiatric symptoms
             are diagnostic of Acute
             intermittent Porphyria.
             There is deficiency of
             PBG deaminase enzyme
             (Porphobilinogen
             deaminase)
10/28/2012                     Biochemistry For Medics   23
Spot Question




             State at least 2 metabolic complications of obesity and give the
             reason for obesity upon excessive carbohydrate consumption.

10/28/2012                         Biochemistry For Medics                      24
Obesity                             Obesity is associated
                                                 with hypertension,
                                                 dyslipidemia, insulin
                                                 resistance, diabetes
                                                 mellitus, IHD and gall
                                                 bladder disease.
                                                 Excessive carbohydrate
                                                 consumption provides
                                                 glycerol and Acetyl co A
                                                 through formation of
                                                 Pyruvate from Glucose
                                                 and NADPH through
                                                 HMP pathway. This
                                                 helps in fatty acid
                                                 biosynthesis and more
                                                 formation of
10/28/2012             Biochemistry For Medics   triglycerides.         25
Spot Question




       Name two chief nutrients of milk and state the
       reason for milk intolerance in certain individuals.

10/28/2012                 Biochemistry For Medics           26
Answer
                                                     The important
                                                    components of milk are
                                                    lactose as milk sugar,
                                                    casein, lactalbumin and
                                                    lactglobulins as milk
                                                    proteins. The average
                                                    distribution of
                                                    nutrients is- 87.7%
                                                    water, 4.9% lactose
                                                    (carbohydrate), 3.4%
                                                    fat, 3.3% protein, and
                                                    0.7% minerals.
             Milk intolerance (Lactose intolerance) occurs due to deficiency of
             lactase enzyme, there is inability to digest lactose and the
10/28/2012   associated symptoms are due to accumulated lactose .
                                     Biochemistry For Medics                      27
Spot Question




       Based on the findings in the peripheral blood film, the patient
       has been diagnosed with megaloblastic anemia. Name at least
       two vitamins known to cause megaloblastic anemia

10/28/2012                     Biochemistry For Medics                   28
Answer
              Megaloblastic anemia is observed in vitamin B12 and
             folic acid deficiencies.
             Macrocytes are observed and some of the red blood
             cells show ovalocytosis. A 6-lobed polymorph nuclear
             leucocyte is present.
              Oval macrocytes, usually with considerable
             anisocytosis and poikilocytosis, are the main feature.
              The MCV is usually >100 fL unless a cause of
             microcytosis (e.g., iron deficiency or thalassemia trait) is
             present.



10/28/2012                      Biochemistry For Medics               29
Make a diagnosis
        A 1-year-old girl is brought to her
        pediatrician’s office with concerns about
        her development. She had an
        uncomplicated birth.
        The mother reports that the baby is not
        achieving the normal milestones for a baby
        of her age.
        She also reports an unusual odor to her
        urine and some areas of hypo pigmentation
        on her skin and hair.
10/28/2012             Biochemistry For Medics       30
Make a diagnosis




         On exam, the girl is noted to have some muscle
         hypotonia and microcephaly. The urine collected is
         found to have a “mousy” odor.
         What is the most likely diagnosis?
         What is the biochemical basis of the hypo
         pigmented skin and hair?
10/28/2012                 Biochemistry For Medics            31
Answer
             Likely diagnosis-
             Phenyl ketonuria
             Biochemical defect-
             Deficiency of phenyl
             alanine hydroxylase
             Biochemical basis
             of
             hypopigmentation:
             Phenylalanine is
             competitive
             inhibitor of
             tyrosinase (key
             enzyme in melanin
             synthesis)

10/28/2012                    Biochemistry For Medics   32
Spot Question

              A 37-year-old female presents to your clinic to
             discuss her plans for a new vegetarian diet.
             The patient heard from a friend about a new
             vegetarian diet that promised rapid weight loss.
             The diet consists of many leafy vegetables with
             no pork, chicken, beef, eggs, or milk.
              She is also planning on working out regularly
             with the goal of running a marathon within the
             year.
              After listening to the patient, you refer her to a
             nutritionist for further assistance and guidance

10/28/2012                    Biochemistry For Medics               33
Spot Question




             What is an essential amino acid, and how many
             are there? List the essential amino acids.
10/28/2012                                                              34
                                              Biochemistry For Medics
Answer
             Essential amino acids: The amino acids that cannot
             be synthesized by the body. There are a total of ten
             essential amino acids.
             List of essential amino acids: Isoleucine, leucine,
             lysine, Methionine, Phenylalanine, Threonine,
             Tryptophan, and Valine
             Histidine and Arginine are semi essential amino
             acids, that can be synthesized but their demand
             increases during growth, repair and reproduction.


10/28/2012                   Biochemistry For Medics           35

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Biochemistry spotters

  • 1. Biochemistry Spotters  Case studies  Visuals  Spot Questions  Graphs Biochemistry for Medics www.namrata.co 10/28/2012 Biochemistry For Medics 1
  • 2. Make a Diagnosis  A 29 year- old officer presented to emergency department complaining of chills and breathing difficulty.  He was a heroin abuser who was admitted in the same hospital 7 years ago because of drug over dosage.  He had lost 10 kg of body weight since his last clinical visit.  On examination, he had multiple enlarged lymph nodes. Several red nodules were present on the skin of chest and arms. The chest radiograph showed diffuse pneumonia.  Sputum smear revealed numerous Pneumocystis organisms. Skin biopsy revealed Kaposi’s sarcoma as shown in the picture 10/28/2012 Biochemistry For Medics 2
  • 3. Diagnosis This is a case of HIV infection. History of drug abuse, weight loss, typical presence of lymphadenopathy and AIDS markers- Kaposi sarcoma and Pneumocystis pneumonia signify HIV infection. 10/28/2012 Biochemistry For Medics 3
  • 4. Identify the structure and mention any two of its important uses 10/28/2012 Biochemistry For Medics 4
  • 5. Answer It is Liposome, used for- 1) Drug delivery and 10/28/2012 2) Gene therapyBiochemistry For Medics 5
  • 6. Identify the Protein and mention any two of its important functions 10/28/2012 Biochemistry For Medics 6
  • 7. Answer  It is a structure of collagen.  Collagen is rich in glycine, proline and hydroxy proline amino acids as shown in the figure.  It is mostly found in tendons, ligaments and skin, and is also abundant in cornea, cartilage, bone, blood vessels, the gut, and intervertebral disc.  The fibroblast is the most common cell which creates collagen. 10/28/2012 Biochemistry For Medics 7
  • 8. Make a Diagnosis A 16-year-old African American girl was admitted to the emergency room with complaints of fever and recurrent pain in her arms and legs Her laboratory tests revealed the following: Hemoglobin 8.0 g/dl Haemtocrit 9.1% Serum Iron- 11μg/dl Serum Albumin 4.4g/dl 10/28/2012 Biochemistry For Medics 8
  • 9. Make a Diagnosis Blood Smear showed target cells, poikilocytes, hypochromasia, sickle red cells, nucleated RBCs, and Howell- Jolly bodies Hb Electrophoresis -showed a slow moving band. What is the most probable diagnosis? 10/28/2012 Biochemistry For Medics 9
  • 10. Answer The patient is suffering from sickle cell anemia The Sickle cell disease, also called as sickle cell anemia is due to a single nucleotide alteration (point mutation) in the β globin gene of hemoglobin resulting in rigid misshapen erythrocytes- sickle shaped erythrocytes. Such sickled cells frequently block the flow of blood in the narrow capillaries. The interruption in the supply of oxygen leads to tissue anoxia, causing pain and eventually death of cells (infarction) in the vicinity of blockage. 10/28/2012 Biochemistry For Medics 10
  • 11. Make a Diagnosis A 12 –year-old girl has been brought by her parents for consultation. She has pale skin, blonde hair and pink iris. She is otherwise healthy, but is unable to fix the gaze. Parents reveal that their first two children, a boy and a girl, had similar symptoms, but the parents themselves are normal. What is the most probable diagnosis? 10/28/2012 Biochemistry For Medics 11
  • 12. Make a Diagnosis Normal parents having two affected children, male and female, is suggestive of Autosomal recessive inheritance of oculo-cutaneous albinism. The baby has defect in the synthesis of melanin . Pale skin, blonde hair and pink color of iris, are all due to the absence of melanin. The visual impairment is also typical of albinism. 10/28/2012 Biochemistry For Medics 12
  • 13. Make a Diagnosis A 3-year-old child has been brought to the clinic because of excessive exhaustion and fatigue. On further questioning of the mother, she reports that she was previously breastfeeding but had to stop to return to work. To feed all of her other children, she had to dilute her formula with water to make the formula last longer for the entire family. 10/28/2012 Biochemistry For Medics 13
  • 14. Make a Diagnosis The child is irritable, has starved appearance, weight is much below for height, mid-arm muscle circumference is 12 cm and triceps thickness is 2mm. The creatinine-height index (the 24-h urinary creatinine excretion compared with normal values based on height) is low but serum Albumin is normal. 10/28/2012 Biochemistry For Medics 14
  • 15. Answer The child is suffering from Nutritional Marasmus.  Marasmus is a state in which virtually all available body fat stores are exhausted due to starvation. The given patient has starved appearance diagnostic of Marasmus. The low body weight, diminished skin-fold thickness and reduced arm muscle circumference reflect the loss of fat reserves and the catabolism of proteins throughout the body.  The low creatinine-height index also reflects the loss of muscle mass while the normal serum albumin differentiates it from Kwashiorkor which is primarily due to protein deficiency. 10/28/2012 Biochemistry For Medics 15
  • 16. Spot Question A 60- year- old woman presents with chest pain radiating to her left arm. She is diagnosed with having had a myocardial infarct and is prescribed a statin medication. Statin is known as a Hypolipidemic drug. What is the mechanism of action of this drug ? 10/28/2012 Biochemistry For Medics 16
  • 17. Answer The Statins act as competitive inhibitors of the enzyme HMG-CoA reductase, the rate limiting enzyme of the pathway of cholesterol biosynthesis. Lovastatin is a member of a class of drugs (Atorvastatin, fluvastatin, pravastatin and Simvastatin are others in this class) called statins that are used to treat hypercholesterolemia. 10/28/2012 Biochemistry For Medics 17
  • 18. Make a diagnosis An 11-year-old girl has been brought by her parents to the accident & emergency department in a confused state with symptoms of acute abdomen, respiratory difficulty & acetone-like smell of breath. She is a known case of Type 1 Diabetes Mellitus but is non compliant to insulin therapy. What is the likely diagnosis? What is the expected outcome of urine analysis ? 10/28/2012 Biochemistry For Medics 18
  • 19. Answer The girl is suffering from Diabetic ketoacidosis, the most frequent complication of Type 1 DM. Urine analysis is expected to reveal the presence of glucose and ketone bodies while blood biochemistry would reveal, hyperglycemia, metabolic acidosis, and volume depletion due to osmotic diuresis. 10/28/2012 Biochemistry For Medics 19
  • 20. Spot Question The above Line weaver-Burk plot shows the mechanism of action of a drug used for the treatment of gout. The said drug acts by inhibiting xanthine oxidase enzyme. Which type of inhibition is shown in the graph? Name a similarly acting drug used for the treatment of 10/28/2012 hypertension. Biochemistry For Medics 20
  • 21. Answer Since the Km has increased and Vmax is constant , it is competitive inhibition. Allopurinol acts by inhibiting Xanthine oxidase enzyme. Captopril, an antihypertensive drug acts similarly to competitively inhibit, Angiotensin Converting Enzyme (ACE). 10/28/2012 Biochemistry For Medics 21
  • 22. Make a diagnosis A 24- year- old patient was brought to medical OPD with acute abdominal pain, depression and extreme weakness. Urine analysis revealed purple color and the presence of ALA and PBG (Delta amino Levulinic acid and Porphobilinogen). What is the probable diagnosis and defect in this disease ? 10/28/2012 Biochemistry For Medics 22
  • 23. Answer It is a case of Acute intermittent Porphyria.  Purple colored urine, presence of ALA (Delta amino levuliinic acid) and PBG (Porphobilinogen) and  Psychiatric symptoms are diagnostic of Acute intermittent Porphyria. There is deficiency of PBG deaminase enzyme (Porphobilinogen deaminase) 10/28/2012 Biochemistry For Medics 23
  • 24. Spot Question State at least 2 metabolic complications of obesity and give the reason for obesity upon excessive carbohydrate consumption. 10/28/2012 Biochemistry For Medics 24
  • 25. Obesity Obesity is associated with hypertension, dyslipidemia, insulin resistance, diabetes mellitus, IHD and gall bladder disease. Excessive carbohydrate consumption provides glycerol and Acetyl co A through formation of Pyruvate from Glucose and NADPH through HMP pathway. This helps in fatty acid biosynthesis and more formation of 10/28/2012 Biochemistry For Medics triglycerides. 25
  • 26. Spot Question Name two chief nutrients of milk and state the reason for milk intolerance in certain individuals. 10/28/2012 Biochemistry For Medics 26
  • 27. Answer The important components of milk are lactose as milk sugar, casein, lactalbumin and lactglobulins as milk proteins. The average distribution of nutrients is- 87.7% water, 4.9% lactose (carbohydrate), 3.4% fat, 3.3% protein, and 0.7% minerals. Milk intolerance (Lactose intolerance) occurs due to deficiency of lactase enzyme, there is inability to digest lactose and the 10/28/2012 associated symptoms are due to accumulated lactose . Biochemistry For Medics 27
  • 28. Spot Question Based on the findings in the peripheral blood film, the patient has been diagnosed with megaloblastic anemia. Name at least two vitamins known to cause megaloblastic anemia 10/28/2012 Biochemistry For Medics 28
  • 29. Answer  Megaloblastic anemia is observed in vitamin B12 and folic acid deficiencies. Macrocytes are observed and some of the red blood cells show ovalocytosis. A 6-lobed polymorph nuclear leucocyte is present.  Oval macrocytes, usually with considerable anisocytosis and poikilocytosis, are the main feature.  The MCV is usually >100 fL unless a cause of microcytosis (e.g., iron deficiency or thalassemia trait) is present. 10/28/2012 Biochemistry For Medics 29
  • 30. Make a diagnosis A 1-year-old girl is brought to her pediatrician’s office with concerns about her development. She had an uncomplicated birth. The mother reports that the baby is not achieving the normal milestones for a baby of her age. She also reports an unusual odor to her urine and some areas of hypo pigmentation on her skin and hair. 10/28/2012 Biochemistry For Medics 30
  • 31. Make a diagnosis On exam, the girl is noted to have some muscle hypotonia and microcephaly. The urine collected is found to have a “mousy” odor. What is the most likely diagnosis? What is the biochemical basis of the hypo pigmented skin and hair? 10/28/2012 Biochemistry For Medics 31
  • 32. Answer Likely diagnosis- Phenyl ketonuria Biochemical defect- Deficiency of phenyl alanine hydroxylase Biochemical basis of hypopigmentation: Phenylalanine is competitive inhibitor of tyrosinase (key enzyme in melanin synthesis) 10/28/2012 Biochemistry For Medics 32
  • 33. Spot Question  A 37-year-old female presents to your clinic to discuss her plans for a new vegetarian diet. The patient heard from a friend about a new vegetarian diet that promised rapid weight loss. The diet consists of many leafy vegetables with no pork, chicken, beef, eggs, or milk.  She is also planning on working out regularly with the goal of running a marathon within the year.  After listening to the patient, you refer her to a nutritionist for further assistance and guidance 10/28/2012 Biochemistry For Medics 33
  • 34. Spot Question What is an essential amino acid, and how many are there? List the essential amino acids. 10/28/2012 34 Biochemistry For Medics
  • 35. Answer Essential amino acids: The amino acids that cannot be synthesized by the body. There are a total of ten essential amino acids. List of essential amino acids: Isoleucine, leucine, lysine, Methionine, Phenylalanine, Threonine, Tryptophan, and Valine Histidine and Arginine are semi essential amino acids, that can be synthesized but their demand increases during growth, repair and reproduction. 10/28/2012 Biochemistry For Medics 35