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Journal of the Formosan Medical Association (2013) 112, 537e544 
Available online at www.sciencedirect.com 
journal homepage: www. jfma-online.com 
ORIGINAL ARTICLE 
A feasible strategy of preimplantation 
genetic diagnosis for carriers with 
chromosomal translocation: Using blastocyst 
biopsy and array comparative genomic 
hybridization 
Chu-Chun Huang a,d, Li-Jung Chang a,d, Yi-Yi Tsai a, 
Chia-Cheng Hung b, Mei-Ya Fang b, Yi-Ning Su a,b,c, 
Hsin-Fu Chen a,*, Shee-Uan Chen a,* 
a Department of Obstetrics and Gynecology, National Taiwan University Hospital and College of 
Medicine, Taipei, Taiwan 
b Department of Medical Genetics, National Taiwan University Hospital and College of Medicine, 
Taipei, Taiwan 
c Graduate Institute of Clinical Genomics, National Taiwan University Hospital and College of Medicine, 
Taipei, Taiwan 
Received 28 September 2012; received in revised form 23 January 2013; accepted 20 February 2013 
KEYWORDS 
array comparative 
genomic 
hybridization 
(aCGH); 
blastocyst biopsy; 
chromosomal 
translocation; 
infertility; 
preimplantation 
genetic diagnosis 
(PGD) 
Background/Purpose: Patients with chromosomal translocation are highly vulnerable to pro-duce 
unbalanced gametes that result in recurrent miscarriages, affected offspring, or infer-tility. 
Preimplantation genetic diagnosis (PGD) with blastomere biopsy and fluorescent 
in-situ hybridization (FISH) has been used to select normal/balanced embryos for transfer. 
However, FISH is inherent with some technical difficulties such as cell fixation and signal 
reading. Here we introduce a strategy of PGD using blastocyst biopsy and array comparative 
genomic hybridization (aCGH) for reproductive problems of patients with chromosomal trans-location. 
Methods: Twelve patients diagnosed as having chromosomal translocation who underwent PGD 
cycles were included in this single-center observational study. Blastocyst biopsy was per-formed 
and biopsied blastocysts were cryopreserved individually. Testing was performed with 
aCGH, and the euploid embryos were transferred in the following thawing cycles. 
* Corresponding authors. Department of Obstetrics and Gynecology, National Taiwan University Hospital, 7 Chung-Shan South Road, 
Taipei, Taiwan. 
E-mail addresses: hfchen@ntu.edu.tw (H.-F. Chen), sheeuan@ntu.edu.tw (S.-U. Chen). 
d These authors contributed equally to this study. 
0929-6646/$ - see front matter Copyright ª 2013, Elsevier Taiwan LLC & Formosan Medical Association. All rights reserved. 
http://dx.doi.org/10.1016/j.jfma.2013.02.010
538 C.-C. Huang et al. 
Results: The overall diagnostic efficiency was 90.2% (55/61) and the euploidy rate was 32.7% 
(18/55). Ten cycles of thawed embryo transfer (ET) were carried out, resulting in three live 
births and another three ongoing pregnancies with an ongoing pregnancy rate of 60%/transfer 
cycle. The prenatal diagnosis with chorionic villi sampling confirmed the results of PGD/aCGH 
in all six pregnant women. No miscarriage happened in our case series. 
Conclusion: Our study demonstrates an effective PGD strategy with promising outcomes. Blas-tocyst 
biopsy can retrieve more genetic material and may provide more reliable results, and 
aCGH offers not only detection of chromosomal translocation but also more comprehensive 
analysis of 24 chromosomes than traditional FISH. More cases are needed to verify our results 
and this strategy might be considered in general clinical practice. 
Copyright ª 2013, Elsevier Taiwan LLC & Formosan Medical Association. All rights reserved. 
Introduction 
Chromosomal rearrangements are the most common struc-tural 
chromosome abnormalities, with an estimated 0.19% 
prevalence in the general population, and even higher in 
certain populations, such as 5% in patients who underwent 
in vitro fertilization (IVF) treatments and experienced 
recurrent miscarriages and repeated IVF failure.1 Carriers of 
balanced chromosomal rearrangements usually have normal 
phenotype, but have a high risk (19e77%) of producing 
chromosomally unbalanced gametes following abnormal 
meiotic segregation, depending on the type of chromosome 
aberration, the chromosomes involved, and the number and 
location of breakpoints.2 This may result in infertility, 
recurrent miscarriages (spontaneous or induced after pre-natal 
diagnosis), or delivery of an affected offspring with 
mental retardation or other congenital abnormalities.1,3 
In the past, these patients could only have prenatal 
diagnosis to confirm the karyotype of the fetus after 
considerable time and effort to get pregnant, and they may 
even suffer more if the results show an unbalanced trans-location. 
Alternatively, they might decide to choose a 
sperm donor or oocyte donor after repeated failure to 
achieve a normal pregnancy. Sometimes this may cause 
infertility and usually the couples experience repeated IVF 
failures and enormous psychological stress when they seek 
help from assisted reproductive technologies (ART).3,4 
Preimplantation genetic diagnosis (PGD), combined with 
ART, can identify and select only chromosomally normal or 
balanced embryos to be transferred to the uterus.5e7 It has 
been shown that PGD can significantly shorten the time to 
achieve a successful live birth from 4e6 years to <4 months, 
and decrease the incidence of miscarriage from >90% to 
<15% in the translocation carriers.4,8 This offers an alter-native 
for the carriers in that they do not need to suffer from 
the tremendous grief of repeated early pregnancy losses or 
to terminate the affected pregnancy once revealed by the 
prenatal diagnosis.4 
The most widespread method of PGD for translocation is 
eight-cell stage embryo biopsy with fluorescence in situ hy-bridization 
(FISH) followed by Day 4 or Day 5 embryo transfer 
(ET) in a fresh IVF cycle.9e11 However, the FISH method has 
some drawbacks including difficulties in fixation of blasto-meres, 
hybridization failure, signal overlap, and signal split-ting 
that can affect the accuracy of the interpretation.12,13 
Newer techniques have been proposed to increase the 
diagnostic accuracy and efficiency, such as the application of 
polymerase chain reaction (PCR)-based PGD protocol, meta-phase 
comparative genomic hybridization (CGH), and array 
CGH (aCGH).1,3 However, FISH and PCR-based methods only 
allow identification for a limited number of chromosomes, 
whereas CGH and aCGH can detect all 24 chromosomes. 
Although FISH methods are cheaper and can usually provide 
translocation screening, they usually need workup to deter-mine 
the appropriate probes to be utilized for the often de-novo 
rearrangements specific to the individual. Also, they 
do not allow for comprehensive aneuploidy screening.1,3,12 
Furthermore, in some cases commercial FISH probes are not 
available for the chromosome of interest due to cross hy-bridization 
with other regions. However, these patients can 
now benefit from aCGH as it is genome wide and does not 
require a specific test to be developed.1,3,11,12 
The most suitable methodological design in the practice 
of PGD has not been well established. Polar body biopsy can 
be used for the genetic analysis of the oocyte but is not 
feasible for detecting male genetic problems. In contrast to 
eight-cell embryo biopsy, blastocyst biopsy provides more 
cells than the cleavage-stage biopsy (5e10 cells vs. 1 or 2 
cells) for genetic analysis and may potentially increase the 
diagnostic accuracy. Both of them allow analysis of chro-mosomes 
from maternal and paternal origin.6,7,14 Here we 
report a strategy of PGD using blastocyst biopsy, aCGH, and 
thawed ET for patients with chromosomal translocation. 
We analyzed the data of clinical treatments. The pre-liminary 
results indicate that this strategy is an important 
option for these patients. 
Materials and methods 
Study population 
This was a single-center observational study. Patients who 
were diagnosed as having chromosomal translocations and 
requested PGD at National Taiwan University Hospital from 
January 2011 to April 2012 were included. A comprehensive 
counseling was provided by an experienced clinical genet-icist 
and reproductive endocrinologist to each couple prior 
to starting the treatment. The participants were well 
informed on the procedures of IVF and PGD with aCGH, its 
efficacy, and limitations. Data on the parental age, family 
and reproductive history, reasons for karyotyping, and their
PGD with aCGH for chromosomal rearrangement 539 
specific types of chromosomal aberration were recorded. 
Written informed consent was obtained from each couple. 
This study was approved by the Ethics Committee of Na-tional 
Taiwan University Hospital. 
For each PGD cycle the following data were recorded: 
the number of retrieved oocytes; number of mature oo-cytes 
(metaphase II oocytes); number of fertilized oocytes; 
number of biopsied embryos; location and size of chromo-somal 
aberrations in each diagnosed embryos; and preg-nancy 
outcomes after ET. The primary outcome 
measurements were diagnostic rate, euploidy rate, and 
ongoing pregnancy rate. 
Blastocyst biopsy and cryopreservation of biopsied 
embryos 
Ovarian stimulation was performed with either 
gonadotropin-releasing hormone (GnRH) antagonist proto-col 
or GnRH agonist short protocol as described pre-viously. 
15e17 Retrieval of oocytes was performed vaginally. 
In order to avoid contamination from sperm or surrounding 
cumulus cells, intracytoplasmic sperm injection was per-formed 
in every case. Embryos that had reached blastocyst 
stage were biopsied at trophectoderm on either Day 5 or 
Day 6, based on the method described by Chen et al.18 Five 
to 10 trophoblasts were aspirated from each blastocyst and 
were transferred to a separate PCR tube. The biopsied 
blastocyst was treated with cryoprotectants and trans-ferred 
onto a Cryotop (Kitazato Supply Co., Fujinomiya, 
Japan) individually.19 
Whole genome amplification and aCGH 
The multiple displacement amplification method using 
SurePlex Whole Genome Amplification (WGA) Kit (Blue- 
Gnome, Cambridge, UK) was performed for WGA, according 
to the manufacturer’s instruction. This technology is based 
on random fragmentation of genomic DNA and subsequent 
amplification by PCR utilizing flanking universal priming 
sites. Amplified sample DNA and control DNA were then 
labeled with Cy3 and Cy5 fluorophores respectively and co-hybridized 
competitively to a bacterial artificial chromo-some 
microarray platform (24sure; BlueGnome). The times 
for labeling and hybridization were 16 hours and 3 hours, 
respectively. The resolution of the microarray was esti-mated 
at 2e5 Mbp depending on the specific type and 
location of a genetic aberration. The hybridized 24sure 
slides were then washed to remove unhybridized DNA with 
Hybex Microarray Incubation System (BlueGnome). Micro-array 
slides were dried in the vacuum centrifuge and then 
scanned. The hybridized fluorophores were excited and the 
resulting images of the hybridization read and stored by a 
two-channel laser scanner. Finally the results were 
analyzed and the whole chromosomal loss or gain reported 
with BlueFuse Multi software (BlueGnome). 
Thawed ET 
When clear results of aCGH were seen, euploid blastocysts 
were thawed and transferred with two different protocols 
of endometrial preparation. One was natural ovulation 
cycle that no additional gonadotropin or synthesized 
ovarian steroids were given prior to ovulation and the em-bryos 
were thawed 6 days after observing serum luteinizing 
hormone surge. Another endometrial preparation consisted 
of estradiol valerate (Estrade; Synmosa, Taipei, Taiwan) 
and 8% intravaginal progesterone gel (Crinone; Merck 
Serono, Geneva, Switzerland) supplement and the embryos 
were thawed on the sixth day of progesterone administra-tion. 
20 Patients with a positive pregnancy test continued 
with estrogen and progesterone supplementation until 12 
weeks’ gestation. 
ET was performed 3e4 hours after warming, as described 
previously.20 One or two embryos were transferred/cycle. 
Biochemical pregnancy was confirmed with serum b-human 
chorionic gonadotropin test 12 days after ET. Implantation 
was determined by the presence of a gestational sac ac-cording 
to transvaginal ultrasound at a gestational age of 5 
weeks. The ongoing pregnancy was defined as presence of 
fetal heart beat until 12 weeks of gestation. 
Confirmation of karyotype of fetus with 
conventional prenatal diagnosis 
In cases where pregnancies were achieved, conventional 
prenatal diagnosis with chorionic villi sampling (CVS) or 
amniocentesis was offered to confirm the karyotype of the 
fetus. 
Statistical analyses 
Statistical analysis was performed using SPSS version 17.0 
software (SPSS Inc., Chicago, IL, USA). Categorical data are 
presented as number of events/cases and percentages for 
each group of interest. Continuous data are presented as 
mean and standard error of the mean. 
Results 
A total of 12 patients diagnosed with a variety of chromo-somal 
translocation, including 11 with reciprocal trans-location 
and one with Robertsonian translocation, were 
enrolled. The age, karyotype, the reason for karyotyping, 
pregnancy history of each couple are listed in Table 1 and 
Table 2. The reasons for karyotyping included six cases of 
repeated miscarriages, three cases of oligospermia, two 
cases of previously affected child, and one case of repeated 
IVF failure. The case with repeated IVF failure underwent a 
total of eight IVF cycles due to endometriosis factor prior to 
karyotyping and all failed. The karyotypes of the spouses 
were all normal. 
Previous pregnancy history of 12 couples showed a total 
of 24 previous pregnancies. These resulted in 20 cases of 
spontaneous abortions prior to 12 weeks of gestational age, 
one case of intrauterine fetal demise at second trimester, 
and one case of elective termination of pregnancy at sec-ond 
trimester due to abnormal karyotyping by prenatal 
diagnosis. There was one normal live birth, which was 
conceived via conventional IVF treatment. The other live 
birth was affected with unbalanced autosomal trans-location, 
showing congenital hypotonia and developmental 
delay.
540 C.-C. Huang et al. 
The characteristics and outcomes of PGD cycles are 
shown in Table 3. A total of 12 PGD cycles were performed 
with blastocyst biopsy and aCGH, followed by cryopreser-vation 
and thawed ET in the next menstrual cycle. A total of 
201 oocytes were retrieved (average 16.8 oocytes/cycle, 
range 4e33) and 172 of them were at the metaphase II 
stage. Of these, 137 were fertilized normally under intra-cytoplasmic 
sperm injection procedure, achieving a 79.7% 
fertilization rate. Sixty-one (44.5%) embryos developed into 
blastocysts and underwent blastocyst biopsy either on Day 5 
(26 embryos, 42.6%) or Day 6 (35 embryos, 57.4%), 
depending on the speed of development. 
WGA was processed successfully on 55 samples and the 
results of aCGH were clearly obtained on all samples with 
successful amplification. The smallest detected 
chromosomal aberration is 1.6 Mbp. Among the diagnosed 
embryos, 18 of them (32.7%) were unaffected or balanced 
without other aneuploidy; 16 (29.1%) were unbalanced 
translocation without other aneuploidy; 15 (27.3%) were 
unbalanced translocation with other unrelated aneu-ploidy; 
and six (10.9%) were unaffected or balanced 
translocation but with aneuploidy affecting other unre-lated 
chromosomes. Overall, the percentage of abnormal 
embryos was 67.3% (37/55) in our cohort. The overall 
Table 1 The characteristics of the patients in this cohort. 
Case Maternal 
age 
Paternal 
age 
Karyotype Reason for karyotyping Previous 
miscarriage 
Previous 
affected 
offspring 
Previous 
IVF/ICSI 
cycles prior 
to PGD 
1 33 33 46XY, t(6;14)(q26;q31) Repeated miscarriage 3 0 0 
2 43 45 46XX, t(2;7)(q36.2;p15.1) Affected childa 1 1 0 
3 34 36 46XY, t(20;21)(p10;q10) Oligospermia 0 0 0 
4 31 35 46XY, t(5;21)(q11.2;q11.2) Repeated miscarriage 2 0 0 
5 34 36 46XY, t(9;17)(q34.3;p13.3) Repeated miscarriage 2 0 2 
6 35 36 46XY, t(7;10)(q34;q26.12) Affected child 0 2b 0 
7 36 35 46XY, t(2;10)(p10;q10) Repeated IVF failure 3 0 8 
8 36 42 46XX, t(6;10)(q15;p11.2) Repeated miscarriage 3 0 0 
9 32 36 46XY, t(2;14)(p10;p10) Oligospermia 1 0 3 
10 35 25 45XY, rob(13;14)(q11;q11) Oligospermia 0 0 0 
11 22 25 46XX, t(1;14)(q31;q31) Repeated miscarriage 2 0 0 
12 31 32 46XY, t(9;12)(q11;q13) Repeated miscarriage 3 0 0 
PGD Z preimplantation genetic diagnosis; rob Z Robertsonian translocation. 
a This affected offspring showed limb defects associated with abnormal karyotype inherited paternally and was terminated at 21 
weeks of gestation. 
b Their first pregnancy resulted in live birth but was affected with unbalanced autosomal translocation, showing congenital hypotonia 
and developmental delay. Their second pregnancy also showed unbalanced translocation and they decided to terminate it. 
Table 2 Characteristics of the patients. 
Number of couples 12 
Maternal age 33.8  1.2 (25e43) 
Paternal age 34.7  1.7 (25e45) 
Number of previous miscarriages 1.7  0.4 (0e3) 
Number of previous live births 0.2  0.1 (0e1) 
Number of IVF/ICSI cycles prior 
1.2  0.7 (0e8) 
to PGD 
Reasons for karyotyping 
Oligospermia 3 (25%) 
Repeated miscarriage 6 (50%) 
Affected child 2 (17%) 
Repeated IVF failure 1 (8%) 
Values are expressed as mean  standard error of the mean 
(range) or n (%). 
IVF Z in vitro fertilization; ICSI Z intracytoplasmic sperm in-jection; 
PGD Z preimplantation genetic diagnosis. 
Table 3 Characteristics and outcomes of OPU and PGD 
cycles.a 
Total number of OPUþPGD cycles 12 
Total number of oocytes retrieved 201 
Mean number of oocytes retrieved 16.8  2.5 (4e33) 
Total number of mature oocytes (MII) 172 (85.6%) 
Mean number of mature oocytes (MII) 14.3  2.5 (4e31) 
Total number of fertilized embryos 137 (79.7%) 
Mean number of fertilized embryos 11.4  2.1 (1e23) 
Total number of biopsied embryos 61 (44.5%) 
Mean number of biopsied embryos 5.1  0.9 (1e11) 
Day of biopsy 
Day 5 26 (42.6%) 
Day 6 35 (57.4%) 
Total number of embryos diagnosed 55 (90.2%) 
Normal or balanced translocation 18 (32.7%) 
Unbalanced, without other aneuploidy 16 (29.1%) 
Unbalanced, with other aneuploidy 15 (27.3%) 
Balanced, with other aneuploidy 6 (10.9%) 
Total number of embryos undiagnosed 6 (9.8%) 
MII Z metaphase II; OPU Z oocyte pick-up; 
PGD Z preimplantation genetic diagnosis. 
a Values are expressed as mean  standard error of the mean 
(range) or n (%).
PGD with aCGH for chromosomal rearrangement 541 
diagnostic efficacy was 90.2% (55 results from a total of 61 
samples) and the main reason for nondiagnosis was 
amplification failure. 
Thawed ET was performed in nine couples following PGD 
cycles as in Table 4. Three couples did not have normal/ 
balanced embryos. In total 15 normal or balanced embryos 
were thawed and 14 survived with a survival rate of 93.3%. 
Seven of 14 transferred embryos (50%) implanted, resulting 
in three live births and another three ongoing pregnancies. 
The mean number of transferred embryos was 1.4. The 
ongoing pregnancy rate was 60%/transfer cycle and 50%/ 
PGD cycle. The prenatal diagnosis with CVS reconfirmed the 
results of PGD/aCGH in all six pregnant women. There were 
three euploid embryos still cryopreserved for three cou-ples, 
which could be transferred in the future. The detailed 
karyotypic information of each diagnosed embryo is listed 
in Table 5. 
Discussion 
Our study demonstrates an effective strategy of PGD 
treatment for the reproductive problems of carriers of 
chromosomal translocations using blastocyst biopsy, aCGH, 
and thawed ET. Reviewing the literature, we found two 
other studies using aCGH to perform PGD for the carriers of 
chromosomal translocations.1,3 The diagnostic efficacy 
ranged from 90% to 93.5% in our study and the other two 
studies, which were comparable with those studies using 
FISH.1e3,21,22 However, the clinical pregnancy rate seemed 
to be higher in the studies using aCGH, which were 42.9%/ 
PGD cycle by Fiorentino et al,3 and 50% in our study. The 
reported clinical pregnancy rate in those studies using FISH 
ranged from 16% to 33%.1e3,9,21e25 More interestingly, no 
case of miscarriage took place in our study and the other 
two studies using aCGH, whereas the reported miscarriage 
rates of the studies using FISH were 2e37.5% in the liter-ature. 
1e3,9,21e25 The elevation of clinical pregnancy rate 
and elimination of miscarriage in our study and Fiorentino 
et al’s study might be due to the advantage of the 
comprehensive 24 chromosomal aneuploidy screening pro-vided 
by aCGH. More studies will be needed to verify our 
preliminary result. 
aCGH using 24sure technology was performed for genetic 
analysis in our study. It provides 24-chromosome analysis to 
screen both the translocation and all the other aneu-ploidies, 
instead of a set of usually 5e12 chromosomal 
probes used by traditional FISH method. It can detect 
spontaneous aneuploidy other than specific translocation 
derived from carriers.26,27 In our study, 10.9% (6/55) em-bryos 
were normal or balanced at the chromosomes 
involved in the translocation but were found to have other 
de novo aneuploidies. They will be misdiagnosed as normal 
embryos by the conventional FISH method and be trans-ferred, 
which might end with poor pregnancy outcomes, 
such as miscarriage or an affected offspring. 
Array CGH also avoids many technical drawbacks 
inherent in the FISH method. One critical but difficult step 
is the fixation of a single cell onto a microscopic 
slide.13,26,27 Also, the misdiagnosis may happen due to hy-bridization 
failure, suboptimal signal interpretation, such 
as overlapping signals or split signals.13 Moreover, aCGH 
allows automation in data reading through computerized 
calculation of signal intensities, instead of interpreting the 
signals by eye in the FISH method, which may be subject to 
interoperator error.13 Another advantage of aCGH is that it 
does not require preclinical validation prior to each IVF 
cycle, which is required for FISH. This avoids postponement 
of treatment.3,7,28 
Both allele dropout (ADO) and preferential amplifica-tion 
(PA) can decrease the reliability of PGD, especially 
for the autosomal dominant single gene disorder.29 
Because amplification failure of the affected allele will 
cause serious consequence, one solution is to analyze 
more loci near the targeted allele.11,29 From the previous 
studies published on single-cell multiple displacement 
amplification, the ADO rates and PA rates could reach as 
high as 25%.29 If more loci are analyzed at the same time, 
ADO rates can be decreased to less than 10% and PA rates 
even lower.29 Fiorentino et al also reported that when 
three short tandem repeat markers are put in either side 
of the translocation breakpoints, the failure rate of the 
test is about 0.002%, which happens only when ADO oc-curs 
in all markers at the same time.12 For carriers of 
chromosomal translocation, the aberrant chromosomal 
segments of the unbalanced gametes are much larger, 
which usually involve more than four or five continuous 
probes on the microarray platform. Therefore the inci-dence 
of co-amplification failure of all four or five probes 
should also be low. 
The smallest aberration detected in our study was a 
1.6 Mbp deletion, which is better than FISH or even the 
traditional metaphase CGH (5e10 Mbp),1 providing a con-vincible 
and satisfactory screening resolution with this 
technique. The cost of FISH is US$2167 in our center, no 
matter how many embryos are analyzed. The cost of aCGH 
depends on the number of analyzed embryos and is US$600/ 
embryo. The average number of analyzed embryos is 5.1, 
giving an average cost of around US$3000 in our study. 
Therefore it is often more expensive to perform aCGH than 
FISH and both the cost and the benefits should be discussed 
with the patients in clinical practice. 
Table 4 Pregnancy outcomes of thawed embryo transfer. 
Total number of embryo transfer cycles 10 
Total number of embryos thawed 15 
Number of embryos surviving after thawing 14 (93.3%) 
Total number of embryos transferred 14 
Mean number of embryos transferred 1.4  0.2 
(1 or 2) 
Total number of embryos implanted (sac) 7 
Implantation rate/embryo transferred 50% (7/14) 
Total number of FHB 7 
Pregnancy rate (positive b-hCG)/transfer 
cycle 
80% (8/10) 
Ongoing pregnancy rate/transfer cyclea 60% (6/10) 
Ongoing pregnancy rate/PGD cyclea 50% (6/12) 
b-hCG Z b-human chorionic gonadotropin; FHB Z fetal heart 
beat. 
a Ongoing pregnancy was defined as the presence of fetal 
heart beat until 12 weeks of gestation.
542 C.-C. Huang et al. 
Table 5 Detailed information of microarray platform in each diagnosed embryo. 
Case Karyotype of the 
affected couple 
Embryo 
no. 
Results of microarray platform Final characterization 
Chromosomal gain Chromosomal loss 
1 46XY, t(6;14)(q26;q31) 1 14q32.12e14q32.33 d Abnormal 
2 d 14q32.12e14q32.33 Abnormal 
3 Euploid Normal/balanced 
4 1q42.2e1q44 Chr. 2 Abnormal 
5 No signal Undiagnosed 
6 No signal Undiagnosed 
7 14q32.12e14q32.33 d Abnormal 
8 Euploid Normal/balanced 
9 9q21.33e9q34.3; 
14q32.12e14q32.33 
Chr. 16 Abnormal 
10 No signal Undiagnosed 
11 d Chr. 14 Abnormal 
2 46XX, t(2;7)(q36.2;p15.1) 1 d Chr. 2; 7p22.3e7p15.3 Abnormal 
3 46XY, t(20;21)(p10;q10) 1 Euploid Normal/balanced 
2 Chr. 1, 3, 5, 9, 13, Y Chr. 4, 8, 18, 21, 22, X Abnormal 
3 d 9q31.3e9q34.3; Abnormal 
11p15.5e11p15.4; 
20p13e20p11.21 
4 Euploid Normal/balanced 
5 8q23.3e8q24.3; 
10q26.2e10q26.3; 
11q13.1e11q25; 
20p13e20p11.21 
d Abnormal 
4 46XY, t(5;21)(q11.2;q11.2) 1 21q21.1eq22.3 5q13.2eq35.3 Abnormal 
2 Euploid Normal/balanced 
3 5p15.33eq13.1 21q11.2eq21.1 Abnormal 
4 5q13.2eq35.3; 
11p15.5ep15.1 
5p15.33eq13.1; 
21q21.1eq22.3 
Abnormal 
5 21q21.1eq22.3 5q13.2eq35.3 Abnormal 
6 1p12eq44; 6q22.31eq27; 
21q11.2eq22.3 
5q13.2eq35.3; 
9p24.3e21.3 
Abnormal 
7 21q11.2eq21.1 5p15.33eq13.1 Abnormal 
8 Euploid Normal/balanced 
9 22q11.1eq13.31 d Abnormal 
10 No signal Undiagnosed 
11 5q13.2eq35.3 21q21.1eq22.3 Abnormal 
5 46XY, t(9;17)(q34.3;p13.3) 1 9q33.2eq34.3 17p13.3ep12 Abnormal 
6 46XY, t(7;10)(q34;q26.12) 1 Euploid Normal/balanced 
2 10q26.13eq26.3 Chr. 2, 8; 7q36.1eq36.3 Abnormal 
3 Euploid Normal/balanced 
4 Euploid Normal/balanced 
5 7q36.1eq36.3 Chr. 22; 10q26.13eq26.3 Abnormal 
6 Chr. 22; 7q36.1eq36.3 8p23.3ep12; 
10q26.13eq26.3 
Abnormal 
7 46XY, t(2;10)(p10;q10) 1 Chr. 10, 15, 20 Chr. 14, 17, 21 Abnormal 
2 10p15.3eq21.1 2p11.12eq37.3 Abnormal 
3 Chr. 1, 3, 4, 6, 8, 10, 12, 
14, 16, 17, 20, 22 
Chr. 2, 5, 7, 9, 11, 13, 
15, 18, 19, 21 
Abnormal 
8 46XX, t(6;10)(q15;p11.2) 1 Euploid Normal/balanced 
2 10p15.1ep15.1 6q16.1eq27 Abnormal 
3 10p14ep15.3 6q16.1eq27 Abnormal 
4 6q21eq27 10p15.3ep13 Abnormal 
5 6q21eq27; Chr. 16 10p15.3ep13 Abnormal
PGD with aCGH for chromosomal rearrangement 543 
The best timing for embryo biopsy is still controversial. It 
has been well documented that as many as 66e87% of 
cleavage stage embryos exhibit mosaicism,26,30 which 
means there are at least two different cell lines in one 
embryo. Therefore sampling only one blastomere at an 
early developmental stage may not represent the final ge-netic 
composition and predict the real destiny of the em-bryo. 
26,30 By contrast, sampling several cells (usually 5e10 
cells) during blastocyst biopsy can provide more genetic 
material for analysis, decreasing the risk of misdiagnosis 
due to mosaicism, amplification failure, and allele drop-out 
phenomenon.9 It is assumed that performing biopsy on the 
trophectoderm, which is extraembryonic and develops into 
placental tissue, is less harmful to embryo viability than 
Day 3 blastomere biopsy.9,13,14,31 Moreover, it is also highly 
cost-effective that only competent embryos capable of 
developing to blastocysts and with highest implantation 
potential are biopsied.9,18 
With the advance of modern laboratory techniques, the 
successful rate of blastocyst culture and cryopreservation 
has yielded improving and satisfying results.5,31,32 Embryo 
cryopreservation and thawed ET has become the new trend 
of ART with many advantages. First, it can decrease the risk 
of ovarian hyperstimulation syndrome.33 Second, because 
PGD is usually performed at a limited number of specialized 
genetic laboratories, thawed ET provided ample time to 
transport the biopsied samples from the remote infertility 
clinic and to perform genetic diagnosis.7 Third, it has been 
shown that the endocrionological status and the uterine 
receptivity are altered by ovarian stimulation. That may 
decrease the implantation potential in a fresh transfer 
cycle, especially in a high responder.34e36 ET in a subsequent 
thawed cycle can provide a more natural and synchronized 
endometrial environment for embryonic implantation.13,31 
Our data also showed a high implantation rate of 50%. 
In summary, for carriers with chromosomal trans-locations, 
our study describes an feasible PGD strategy, 
applying blastocyst biopsy, aCGH, embryo cryopreserva-tion, 
and thawed ET. aCGH can provide comprehensive 24- 
chromosome analysis and the ongoing pregnancy rate was 
50%/PGD cycle in our study, which seems to be higher than 
previous studies using FISH methods. There was no case of 
miscarriage. Although the number of the patients in our 
study is too small to draw robust conclusions, the pre-liminary 
results may support a promising choice of future 
PGD treatment for these patients. 
Acknowledgments 
The authors would like to thank Ms Chia-Jen Shieh and Ms 
Yi-Lin Yao for their technical assistance. Chu-Chun Huang 
analyzed the data and wrote the article. Li-Jung Chang, Yi- 
Yi Tsai, Chia-Cheng Hung, and Mei-Ya Fang analyzed the 
data and provided essential technical support. Yi-Ning Su, 
Hong-Jiang Chang, Hsin-Fu Chen, and Shee-Uan Chen per-formed 
the research and designed the study. This study was 
supported in part by grants from the National Science 
Council (100-2314-B-002-022-MY3) and National Taiwan 
University Hospital (NTUH 100-S1555), Taipei, Taiwan. 
Table 5 (continued) 
Case 
Karyotype of the 
affected couple 
Embryo 
no. 
Results of microarray platform 
Chromosomal gain Chromosomal loss Final characterization 
9 46XY, t(2;14)(p10;p10) 1 No signal Undiagnosed 
2 Euploid Normal/balanced 
3 2q36.1eq37.1 10q26.3eq26.3 Abnormal 
4 Euploid Normal/balanced 
10 45XY, rob(13;14)(q11;q11) 1 1p36.33e1q44; 
10p15.3e10q26.3; 
12p13.33e15q24.33; 
19p13.3e19q13.42 
5p15.33e5q35.3; 
9p24.3e9q34.3; 
21q11.2e21q22.3; 
Yp11.31eYq12 
Abnormal 
2 Euploid Normal/balanced 
11 46XX, t(1;14)(q31;q31) 1 Euploid Normal/balanced 
2 1p36.33e1q44; 
7p22.3e7q36.3 
14q11.2e14q24.3 Abnormal 
3 Euploid d Normal/balanced 
12 46XY, t(9;12)(q11;q13) 1 16p13.3e16q24.3 d Abnormal 
2 10p15.3e10q26.3 d Abnormal 
3 Euploid Normal/balanced 
4 Euploid Normal/balanced 
5 e Yp11.2eYq12 Abnormal 
6 1p36.33e1q44; 
15q11.1e15q26.3; 
18p11.32e18q23 
d Abnormal 
7 d 12p13.33e12q24.33 Abnormal 
8 Euploid Normal/balanced 
Chr. Z chromosome; rob Z Robertsonian translocation.
544 C.-C. Huang et al. 
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  • 1. Journal of the Formosan Medical Association (2013) 112, 537e544 Available online at www.sciencedirect.com journal homepage: www. jfma-online.com ORIGINAL ARTICLE A feasible strategy of preimplantation genetic diagnosis for carriers with chromosomal translocation: Using blastocyst biopsy and array comparative genomic hybridization Chu-Chun Huang a,d, Li-Jung Chang a,d, Yi-Yi Tsai a, Chia-Cheng Hung b, Mei-Ya Fang b, Yi-Ning Su a,b,c, Hsin-Fu Chen a,*, Shee-Uan Chen a,* a Department of Obstetrics and Gynecology, National Taiwan University Hospital and College of Medicine, Taipei, Taiwan b Department of Medical Genetics, National Taiwan University Hospital and College of Medicine, Taipei, Taiwan c Graduate Institute of Clinical Genomics, National Taiwan University Hospital and College of Medicine, Taipei, Taiwan Received 28 September 2012; received in revised form 23 January 2013; accepted 20 February 2013 KEYWORDS array comparative genomic hybridization (aCGH); blastocyst biopsy; chromosomal translocation; infertility; preimplantation genetic diagnosis (PGD) Background/Purpose: Patients with chromosomal translocation are highly vulnerable to pro-duce unbalanced gametes that result in recurrent miscarriages, affected offspring, or infer-tility. Preimplantation genetic diagnosis (PGD) with blastomere biopsy and fluorescent in-situ hybridization (FISH) has been used to select normal/balanced embryos for transfer. However, FISH is inherent with some technical difficulties such as cell fixation and signal reading. Here we introduce a strategy of PGD using blastocyst biopsy and array comparative genomic hybridization (aCGH) for reproductive problems of patients with chromosomal trans-location. Methods: Twelve patients diagnosed as having chromosomal translocation who underwent PGD cycles were included in this single-center observational study. Blastocyst biopsy was per-formed and biopsied blastocysts were cryopreserved individually. Testing was performed with aCGH, and the euploid embryos were transferred in the following thawing cycles. * Corresponding authors. Department of Obstetrics and Gynecology, National Taiwan University Hospital, 7 Chung-Shan South Road, Taipei, Taiwan. E-mail addresses: hfchen@ntu.edu.tw (H.-F. Chen), sheeuan@ntu.edu.tw (S.-U. Chen). d These authors contributed equally to this study. 0929-6646/$ - see front matter Copyright ª 2013, Elsevier Taiwan LLC & Formosan Medical Association. All rights reserved. http://dx.doi.org/10.1016/j.jfma.2013.02.010
  • 2. 538 C.-C. Huang et al. Results: The overall diagnostic efficiency was 90.2% (55/61) and the euploidy rate was 32.7% (18/55). Ten cycles of thawed embryo transfer (ET) were carried out, resulting in three live births and another three ongoing pregnancies with an ongoing pregnancy rate of 60%/transfer cycle. The prenatal diagnosis with chorionic villi sampling confirmed the results of PGD/aCGH in all six pregnant women. No miscarriage happened in our case series. Conclusion: Our study demonstrates an effective PGD strategy with promising outcomes. Blas-tocyst biopsy can retrieve more genetic material and may provide more reliable results, and aCGH offers not only detection of chromosomal translocation but also more comprehensive analysis of 24 chromosomes than traditional FISH. More cases are needed to verify our results and this strategy might be considered in general clinical practice. Copyright ª 2013, Elsevier Taiwan LLC & Formosan Medical Association. All rights reserved. Introduction Chromosomal rearrangements are the most common struc-tural chromosome abnormalities, with an estimated 0.19% prevalence in the general population, and even higher in certain populations, such as 5% in patients who underwent in vitro fertilization (IVF) treatments and experienced recurrent miscarriages and repeated IVF failure.1 Carriers of balanced chromosomal rearrangements usually have normal phenotype, but have a high risk (19e77%) of producing chromosomally unbalanced gametes following abnormal meiotic segregation, depending on the type of chromosome aberration, the chromosomes involved, and the number and location of breakpoints.2 This may result in infertility, recurrent miscarriages (spontaneous or induced after pre-natal diagnosis), or delivery of an affected offspring with mental retardation or other congenital abnormalities.1,3 In the past, these patients could only have prenatal diagnosis to confirm the karyotype of the fetus after considerable time and effort to get pregnant, and they may even suffer more if the results show an unbalanced trans-location. Alternatively, they might decide to choose a sperm donor or oocyte donor after repeated failure to achieve a normal pregnancy. Sometimes this may cause infertility and usually the couples experience repeated IVF failures and enormous psychological stress when they seek help from assisted reproductive technologies (ART).3,4 Preimplantation genetic diagnosis (PGD), combined with ART, can identify and select only chromosomally normal or balanced embryos to be transferred to the uterus.5e7 It has been shown that PGD can significantly shorten the time to achieve a successful live birth from 4e6 years to <4 months, and decrease the incidence of miscarriage from >90% to <15% in the translocation carriers.4,8 This offers an alter-native for the carriers in that they do not need to suffer from the tremendous grief of repeated early pregnancy losses or to terminate the affected pregnancy once revealed by the prenatal diagnosis.4 The most widespread method of PGD for translocation is eight-cell stage embryo biopsy with fluorescence in situ hy-bridization (FISH) followed by Day 4 or Day 5 embryo transfer (ET) in a fresh IVF cycle.9e11 However, the FISH method has some drawbacks including difficulties in fixation of blasto-meres, hybridization failure, signal overlap, and signal split-ting that can affect the accuracy of the interpretation.12,13 Newer techniques have been proposed to increase the diagnostic accuracy and efficiency, such as the application of polymerase chain reaction (PCR)-based PGD protocol, meta-phase comparative genomic hybridization (CGH), and array CGH (aCGH).1,3 However, FISH and PCR-based methods only allow identification for a limited number of chromosomes, whereas CGH and aCGH can detect all 24 chromosomes. Although FISH methods are cheaper and can usually provide translocation screening, they usually need workup to deter-mine the appropriate probes to be utilized for the often de-novo rearrangements specific to the individual. Also, they do not allow for comprehensive aneuploidy screening.1,3,12 Furthermore, in some cases commercial FISH probes are not available for the chromosome of interest due to cross hy-bridization with other regions. However, these patients can now benefit from aCGH as it is genome wide and does not require a specific test to be developed.1,3,11,12 The most suitable methodological design in the practice of PGD has not been well established. Polar body biopsy can be used for the genetic analysis of the oocyte but is not feasible for detecting male genetic problems. In contrast to eight-cell embryo biopsy, blastocyst biopsy provides more cells than the cleavage-stage biopsy (5e10 cells vs. 1 or 2 cells) for genetic analysis and may potentially increase the diagnostic accuracy. Both of them allow analysis of chro-mosomes from maternal and paternal origin.6,7,14 Here we report a strategy of PGD using blastocyst biopsy, aCGH, and thawed ET for patients with chromosomal translocation. We analyzed the data of clinical treatments. The pre-liminary results indicate that this strategy is an important option for these patients. Materials and methods Study population This was a single-center observational study. Patients who were diagnosed as having chromosomal translocations and requested PGD at National Taiwan University Hospital from January 2011 to April 2012 were included. A comprehensive counseling was provided by an experienced clinical genet-icist and reproductive endocrinologist to each couple prior to starting the treatment. The participants were well informed on the procedures of IVF and PGD with aCGH, its efficacy, and limitations. Data on the parental age, family and reproductive history, reasons for karyotyping, and their
  • 3. PGD with aCGH for chromosomal rearrangement 539 specific types of chromosomal aberration were recorded. Written informed consent was obtained from each couple. This study was approved by the Ethics Committee of Na-tional Taiwan University Hospital. For each PGD cycle the following data were recorded: the number of retrieved oocytes; number of mature oo-cytes (metaphase II oocytes); number of fertilized oocytes; number of biopsied embryos; location and size of chromo-somal aberrations in each diagnosed embryos; and preg-nancy outcomes after ET. The primary outcome measurements were diagnostic rate, euploidy rate, and ongoing pregnancy rate. Blastocyst biopsy and cryopreservation of biopsied embryos Ovarian stimulation was performed with either gonadotropin-releasing hormone (GnRH) antagonist proto-col or GnRH agonist short protocol as described pre-viously. 15e17 Retrieval of oocytes was performed vaginally. In order to avoid contamination from sperm or surrounding cumulus cells, intracytoplasmic sperm injection was per-formed in every case. Embryos that had reached blastocyst stage were biopsied at trophectoderm on either Day 5 or Day 6, based on the method described by Chen et al.18 Five to 10 trophoblasts were aspirated from each blastocyst and were transferred to a separate PCR tube. The biopsied blastocyst was treated with cryoprotectants and trans-ferred onto a Cryotop (Kitazato Supply Co., Fujinomiya, Japan) individually.19 Whole genome amplification and aCGH The multiple displacement amplification method using SurePlex Whole Genome Amplification (WGA) Kit (Blue- Gnome, Cambridge, UK) was performed for WGA, according to the manufacturer’s instruction. This technology is based on random fragmentation of genomic DNA and subsequent amplification by PCR utilizing flanking universal priming sites. Amplified sample DNA and control DNA were then labeled with Cy3 and Cy5 fluorophores respectively and co-hybridized competitively to a bacterial artificial chromo-some microarray platform (24sure; BlueGnome). The times for labeling and hybridization were 16 hours and 3 hours, respectively. The resolution of the microarray was esti-mated at 2e5 Mbp depending on the specific type and location of a genetic aberration. The hybridized 24sure slides were then washed to remove unhybridized DNA with Hybex Microarray Incubation System (BlueGnome). Micro-array slides were dried in the vacuum centrifuge and then scanned. The hybridized fluorophores were excited and the resulting images of the hybridization read and stored by a two-channel laser scanner. Finally the results were analyzed and the whole chromosomal loss or gain reported with BlueFuse Multi software (BlueGnome). Thawed ET When clear results of aCGH were seen, euploid blastocysts were thawed and transferred with two different protocols of endometrial preparation. One was natural ovulation cycle that no additional gonadotropin or synthesized ovarian steroids were given prior to ovulation and the em-bryos were thawed 6 days after observing serum luteinizing hormone surge. Another endometrial preparation consisted of estradiol valerate (Estrade; Synmosa, Taipei, Taiwan) and 8% intravaginal progesterone gel (Crinone; Merck Serono, Geneva, Switzerland) supplement and the embryos were thawed on the sixth day of progesterone administra-tion. 20 Patients with a positive pregnancy test continued with estrogen and progesterone supplementation until 12 weeks’ gestation. ET was performed 3e4 hours after warming, as described previously.20 One or two embryos were transferred/cycle. Biochemical pregnancy was confirmed with serum b-human chorionic gonadotropin test 12 days after ET. Implantation was determined by the presence of a gestational sac ac-cording to transvaginal ultrasound at a gestational age of 5 weeks. The ongoing pregnancy was defined as presence of fetal heart beat until 12 weeks of gestation. Confirmation of karyotype of fetus with conventional prenatal diagnosis In cases where pregnancies were achieved, conventional prenatal diagnosis with chorionic villi sampling (CVS) or amniocentesis was offered to confirm the karyotype of the fetus. Statistical analyses Statistical analysis was performed using SPSS version 17.0 software (SPSS Inc., Chicago, IL, USA). Categorical data are presented as number of events/cases and percentages for each group of interest. Continuous data are presented as mean and standard error of the mean. Results A total of 12 patients diagnosed with a variety of chromo-somal translocation, including 11 with reciprocal trans-location and one with Robertsonian translocation, were enrolled. The age, karyotype, the reason for karyotyping, pregnancy history of each couple are listed in Table 1 and Table 2. The reasons for karyotyping included six cases of repeated miscarriages, three cases of oligospermia, two cases of previously affected child, and one case of repeated IVF failure. The case with repeated IVF failure underwent a total of eight IVF cycles due to endometriosis factor prior to karyotyping and all failed. The karyotypes of the spouses were all normal. Previous pregnancy history of 12 couples showed a total of 24 previous pregnancies. These resulted in 20 cases of spontaneous abortions prior to 12 weeks of gestational age, one case of intrauterine fetal demise at second trimester, and one case of elective termination of pregnancy at sec-ond trimester due to abnormal karyotyping by prenatal diagnosis. There was one normal live birth, which was conceived via conventional IVF treatment. The other live birth was affected with unbalanced autosomal trans-location, showing congenital hypotonia and developmental delay.
  • 4. 540 C.-C. Huang et al. The characteristics and outcomes of PGD cycles are shown in Table 3. A total of 12 PGD cycles were performed with blastocyst biopsy and aCGH, followed by cryopreser-vation and thawed ET in the next menstrual cycle. A total of 201 oocytes were retrieved (average 16.8 oocytes/cycle, range 4e33) and 172 of them were at the metaphase II stage. Of these, 137 were fertilized normally under intra-cytoplasmic sperm injection procedure, achieving a 79.7% fertilization rate. Sixty-one (44.5%) embryos developed into blastocysts and underwent blastocyst biopsy either on Day 5 (26 embryos, 42.6%) or Day 6 (35 embryos, 57.4%), depending on the speed of development. WGA was processed successfully on 55 samples and the results of aCGH were clearly obtained on all samples with successful amplification. The smallest detected chromosomal aberration is 1.6 Mbp. Among the diagnosed embryos, 18 of them (32.7%) were unaffected or balanced without other aneuploidy; 16 (29.1%) were unbalanced translocation without other aneuploidy; 15 (27.3%) were unbalanced translocation with other unrelated aneu-ploidy; and six (10.9%) were unaffected or balanced translocation but with aneuploidy affecting other unre-lated chromosomes. Overall, the percentage of abnormal embryos was 67.3% (37/55) in our cohort. The overall Table 1 The characteristics of the patients in this cohort. Case Maternal age Paternal age Karyotype Reason for karyotyping Previous miscarriage Previous affected offspring Previous IVF/ICSI cycles prior to PGD 1 33 33 46XY, t(6;14)(q26;q31) Repeated miscarriage 3 0 0 2 43 45 46XX, t(2;7)(q36.2;p15.1) Affected childa 1 1 0 3 34 36 46XY, t(20;21)(p10;q10) Oligospermia 0 0 0 4 31 35 46XY, t(5;21)(q11.2;q11.2) Repeated miscarriage 2 0 0 5 34 36 46XY, t(9;17)(q34.3;p13.3) Repeated miscarriage 2 0 2 6 35 36 46XY, t(7;10)(q34;q26.12) Affected child 0 2b 0 7 36 35 46XY, t(2;10)(p10;q10) Repeated IVF failure 3 0 8 8 36 42 46XX, t(6;10)(q15;p11.2) Repeated miscarriage 3 0 0 9 32 36 46XY, t(2;14)(p10;p10) Oligospermia 1 0 3 10 35 25 45XY, rob(13;14)(q11;q11) Oligospermia 0 0 0 11 22 25 46XX, t(1;14)(q31;q31) Repeated miscarriage 2 0 0 12 31 32 46XY, t(9;12)(q11;q13) Repeated miscarriage 3 0 0 PGD Z preimplantation genetic diagnosis; rob Z Robertsonian translocation. a This affected offspring showed limb defects associated with abnormal karyotype inherited paternally and was terminated at 21 weeks of gestation. b Their first pregnancy resulted in live birth but was affected with unbalanced autosomal translocation, showing congenital hypotonia and developmental delay. Their second pregnancy also showed unbalanced translocation and they decided to terminate it. Table 2 Characteristics of the patients. Number of couples 12 Maternal age 33.8 1.2 (25e43) Paternal age 34.7 1.7 (25e45) Number of previous miscarriages 1.7 0.4 (0e3) Number of previous live births 0.2 0.1 (0e1) Number of IVF/ICSI cycles prior 1.2 0.7 (0e8) to PGD Reasons for karyotyping Oligospermia 3 (25%) Repeated miscarriage 6 (50%) Affected child 2 (17%) Repeated IVF failure 1 (8%) Values are expressed as mean standard error of the mean (range) or n (%). IVF Z in vitro fertilization; ICSI Z intracytoplasmic sperm in-jection; PGD Z preimplantation genetic diagnosis. Table 3 Characteristics and outcomes of OPU and PGD cycles.a Total number of OPUþPGD cycles 12 Total number of oocytes retrieved 201 Mean number of oocytes retrieved 16.8 2.5 (4e33) Total number of mature oocytes (MII) 172 (85.6%) Mean number of mature oocytes (MII) 14.3 2.5 (4e31) Total number of fertilized embryos 137 (79.7%) Mean number of fertilized embryos 11.4 2.1 (1e23) Total number of biopsied embryos 61 (44.5%) Mean number of biopsied embryos 5.1 0.9 (1e11) Day of biopsy Day 5 26 (42.6%) Day 6 35 (57.4%) Total number of embryos diagnosed 55 (90.2%) Normal or balanced translocation 18 (32.7%) Unbalanced, without other aneuploidy 16 (29.1%) Unbalanced, with other aneuploidy 15 (27.3%) Balanced, with other aneuploidy 6 (10.9%) Total number of embryos undiagnosed 6 (9.8%) MII Z metaphase II; OPU Z oocyte pick-up; PGD Z preimplantation genetic diagnosis. a Values are expressed as mean standard error of the mean (range) or n (%).
  • 5. PGD with aCGH for chromosomal rearrangement 541 diagnostic efficacy was 90.2% (55 results from a total of 61 samples) and the main reason for nondiagnosis was amplification failure. Thawed ET was performed in nine couples following PGD cycles as in Table 4. Three couples did not have normal/ balanced embryos. In total 15 normal or balanced embryos were thawed and 14 survived with a survival rate of 93.3%. Seven of 14 transferred embryos (50%) implanted, resulting in three live births and another three ongoing pregnancies. The mean number of transferred embryos was 1.4. The ongoing pregnancy rate was 60%/transfer cycle and 50%/ PGD cycle. The prenatal diagnosis with CVS reconfirmed the results of PGD/aCGH in all six pregnant women. There were three euploid embryos still cryopreserved for three cou-ples, which could be transferred in the future. The detailed karyotypic information of each diagnosed embryo is listed in Table 5. Discussion Our study demonstrates an effective strategy of PGD treatment for the reproductive problems of carriers of chromosomal translocations using blastocyst biopsy, aCGH, and thawed ET. Reviewing the literature, we found two other studies using aCGH to perform PGD for the carriers of chromosomal translocations.1,3 The diagnostic efficacy ranged from 90% to 93.5% in our study and the other two studies, which were comparable with those studies using FISH.1e3,21,22 However, the clinical pregnancy rate seemed to be higher in the studies using aCGH, which were 42.9%/ PGD cycle by Fiorentino et al,3 and 50% in our study. The reported clinical pregnancy rate in those studies using FISH ranged from 16% to 33%.1e3,9,21e25 More interestingly, no case of miscarriage took place in our study and the other two studies using aCGH, whereas the reported miscarriage rates of the studies using FISH were 2e37.5% in the liter-ature. 1e3,9,21e25 The elevation of clinical pregnancy rate and elimination of miscarriage in our study and Fiorentino et al’s study might be due to the advantage of the comprehensive 24 chromosomal aneuploidy screening pro-vided by aCGH. More studies will be needed to verify our preliminary result. aCGH using 24sure technology was performed for genetic analysis in our study. It provides 24-chromosome analysis to screen both the translocation and all the other aneu-ploidies, instead of a set of usually 5e12 chromosomal probes used by traditional FISH method. It can detect spontaneous aneuploidy other than specific translocation derived from carriers.26,27 In our study, 10.9% (6/55) em-bryos were normal or balanced at the chromosomes involved in the translocation but were found to have other de novo aneuploidies. They will be misdiagnosed as normal embryos by the conventional FISH method and be trans-ferred, which might end with poor pregnancy outcomes, such as miscarriage or an affected offspring. Array CGH also avoids many technical drawbacks inherent in the FISH method. One critical but difficult step is the fixation of a single cell onto a microscopic slide.13,26,27 Also, the misdiagnosis may happen due to hy-bridization failure, suboptimal signal interpretation, such as overlapping signals or split signals.13 Moreover, aCGH allows automation in data reading through computerized calculation of signal intensities, instead of interpreting the signals by eye in the FISH method, which may be subject to interoperator error.13 Another advantage of aCGH is that it does not require preclinical validation prior to each IVF cycle, which is required for FISH. This avoids postponement of treatment.3,7,28 Both allele dropout (ADO) and preferential amplifica-tion (PA) can decrease the reliability of PGD, especially for the autosomal dominant single gene disorder.29 Because amplification failure of the affected allele will cause serious consequence, one solution is to analyze more loci near the targeted allele.11,29 From the previous studies published on single-cell multiple displacement amplification, the ADO rates and PA rates could reach as high as 25%.29 If more loci are analyzed at the same time, ADO rates can be decreased to less than 10% and PA rates even lower.29 Fiorentino et al also reported that when three short tandem repeat markers are put in either side of the translocation breakpoints, the failure rate of the test is about 0.002%, which happens only when ADO oc-curs in all markers at the same time.12 For carriers of chromosomal translocation, the aberrant chromosomal segments of the unbalanced gametes are much larger, which usually involve more than four or five continuous probes on the microarray platform. Therefore the inci-dence of co-amplification failure of all four or five probes should also be low. The smallest aberration detected in our study was a 1.6 Mbp deletion, which is better than FISH or even the traditional metaphase CGH (5e10 Mbp),1 providing a con-vincible and satisfactory screening resolution with this technique. The cost of FISH is US$2167 in our center, no matter how many embryos are analyzed. The cost of aCGH depends on the number of analyzed embryos and is US$600/ embryo. The average number of analyzed embryos is 5.1, giving an average cost of around US$3000 in our study. Therefore it is often more expensive to perform aCGH than FISH and both the cost and the benefits should be discussed with the patients in clinical practice. Table 4 Pregnancy outcomes of thawed embryo transfer. Total number of embryo transfer cycles 10 Total number of embryos thawed 15 Number of embryos surviving after thawing 14 (93.3%) Total number of embryos transferred 14 Mean number of embryos transferred 1.4 0.2 (1 or 2) Total number of embryos implanted (sac) 7 Implantation rate/embryo transferred 50% (7/14) Total number of FHB 7 Pregnancy rate (positive b-hCG)/transfer cycle 80% (8/10) Ongoing pregnancy rate/transfer cyclea 60% (6/10) Ongoing pregnancy rate/PGD cyclea 50% (6/12) b-hCG Z b-human chorionic gonadotropin; FHB Z fetal heart beat. a Ongoing pregnancy was defined as the presence of fetal heart beat until 12 weeks of gestation.
  • 6. 542 C.-C. Huang et al. Table 5 Detailed information of microarray platform in each diagnosed embryo. Case Karyotype of the affected couple Embryo no. Results of microarray platform Final characterization Chromosomal gain Chromosomal loss 1 46XY, t(6;14)(q26;q31) 1 14q32.12e14q32.33 d Abnormal 2 d 14q32.12e14q32.33 Abnormal 3 Euploid Normal/balanced 4 1q42.2e1q44 Chr. 2 Abnormal 5 No signal Undiagnosed 6 No signal Undiagnosed 7 14q32.12e14q32.33 d Abnormal 8 Euploid Normal/balanced 9 9q21.33e9q34.3; 14q32.12e14q32.33 Chr. 16 Abnormal 10 No signal Undiagnosed 11 d Chr. 14 Abnormal 2 46XX, t(2;7)(q36.2;p15.1) 1 d Chr. 2; 7p22.3e7p15.3 Abnormal 3 46XY, t(20;21)(p10;q10) 1 Euploid Normal/balanced 2 Chr. 1, 3, 5, 9, 13, Y Chr. 4, 8, 18, 21, 22, X Abnormal 3 d 9q31.3e9q34.3; Abnormal 11p15.5e11p15.4; 20p13e20p11.21 4 Euploid Normal/balanced 5 8q23.3e8q24.3; 10q26.2e10q26.3; 11q13.1e11q25; 20p13e20p11.21 d Abnormal 4 46XY, t(5;21)(q11.2;q11.2) 1 21q21.1eq22.3 5q13.2eq35.3 Abnormal 2 Euploid Normal/balanced 3 5p15.33eq13.1 21q11.2eq21.1 Abnormal 4 5q13.2eq35.3; 11p15.5ep15.1 5p15.33eq13.1; 21q21.1eq22.3 Abnormal 5 21q21.1eq22.3 5q13.2eq35.3 Abnormal 6 1p12eq44; 6q22.31eq27; 21q11.2eq22.3 5q13.2eq35.3; 9p24.3e21.3 Abnormal 7 21q11.2eq21.1 5p15.33eq13.1 Abnormal 8 Euploid Normal/balanced 9 22q11.1eq13.31 d Abnormal 10 No signal Undiagnosed 11 5q13.2eq35.3 21q21.1eq22.3 Abnormal 5 46XY, t(9;17)(q34.3;p13.3) 1 9q33.2eq34.3 17p13.3ep12 Abnormal 6 46XY, t(7;10)(q34;q26.12) 1 Euploid Normal/balanced 2 10q26.13eq26.3 Chr. 2, 8; 7q36.1eq36.3 Abnormal 3 Euploid Normal/balanced 4 Euploid Normal/balanced 5 7q36.1eq36.3 Chr. 22; 10q26.13eq26.3 Abnormal 6 Chr. 22; 7q36.1eq36.3 8p23.3ep12; 10q26.13eq26.3 Abnormal 7 46XY, t(2;10)(p10;q10) 1 Chr. 10, 15, 20 Chr. 14, 17, 21 Abnormal 2 10p15.3eq21.1 2p11.12eq37.3 Abnormal 3 Chr. 1, 3, 4, 6, 8, 10, 12, 14, 16, 17, 20, 22 Chr. 2, 5, 7, 9, 11, 13, 15, 18, 19, 21 Abnormal 8 46XX, t(6;10)(q15;p11.2) 1 Euploid Normal/balanced 2 10p15.1ep15.1 6q16.1eq27 Abnormal 3 10p14ep15.3 6q16.1eq27 Abnormal 4 6q21eq27 10p15.3ep13 Abnormal 5 6q21eq27; Chr. 16 10p15.3ep13 Abnormal
  • 7. PGD with aCGH for chromosomal rearrangement 543 The best timing for embryo biopsy is still controversial. It has been well documented that as many as 66e87% of cleavage stage embryos exhibit mosaicism,26,30 which means there are at least two different cell lines in one embryo. Therefore sampling only one blastomere at an early developmental stage may not represent the final ge-netic composition and predict the real destiny of the em-bryo. 26,30 By contrast, sampling several cells (usually 5e10 cells) during blastocyst biopsy can provide more genetic material for analysis, decreasing the risk of misdiagnosis due to mosaicism, amplification failure, and allele drop-out phenomenon.9 It is assumed that performing biopsy on the trophectoderm, which is extraembryonic and develops into placental tissue, is less harmful to embryo viability than Day 3 blastomere biopsy.9,13,14,31 Moreover, it is also highly cost-effective that only competent embryos capable of developing to blastocysts and with highest implantation potential are biopsied.9,18 With the advance of modern laboratory techniques, the successful rate of blastocyst culture and cryopreservation has yielded improving and satisfying results.5,31,32 Embryo cryopreservation and thawed ET has become the new trend of ART with many advantages. First, it can decrease the risk of ovarian hyperstimulation syndrome.33 Second, because PGD is usually performed at a limited number of specialized genetic laboratories, thawed ET provided ample time to transport the biopsied samples from the remote infertility clinic and to perform genetic diagnosis.7 Third, it has been shown that the endocrionological status and the uterine receptivity are altered by ovarian stimulation. That may decrease the implantation potential in a fresh transfer cycle, especially in a high responder.34e36 ET in a subsequent thawed cycle can provide a more natural and synchronized endometrial environment for embryonic implantation.13,31 Our data also showed a high implantation rate of 50%. In summary, for carriers with chromosomal trans-locations, our study describes an feasible PGD strategy, applying blastocyst biopsy, aCGH, embryo cryopreserva-tion, and thawed ET. aCGH can provide comprehensive 24- chromosome analysis and the ongoing pregnancy rate was 50%/PGD cycle in our study, which seems to be higher than previous studies using FISH methods. There was no case of miscarriage. Although the number of the patients in our study is too small to draw robust conclusions, the pre-liminary results may support a promising choice of future PGD treatment for these patients. Acknowledgments The authors would like to thank Ms Chia-Jen Shieh and Ms Yi-Lin Yao for their technical assistance. Chu-Chun Huang analyzed the data and wrote the article. Li-Jung Chang, Yi- Yi Tsai, Chia-Cheng Hung, and Mei-Ya Fang analyzed the data and provided essential technical support. Yi-Ning Su, Hong-Jiang Chang, Hsin-Fu Chen, and Shee-Uan Chen per-formed the research and designed the study. This study was supported in part by grants from the National Science Council (100-2314-B-002-022-MY3) and National Taiwan University Hospital (NTUH 100-S1555), Taipei, Taiwan. Table 5 (continued) Case Karyotype of the affected couple Embryo no. Results of microarray platform Chromosomal gain Chromosomal loss Final characterization 9 46XY, t(2;14)(p10;p10) 1 No signal Undiagnosed 2 Euploid Normal/balanced 3 2q36.1eq37.1 10q26.3eq26.3 Abnormal 4 Euploid Normal/balanced 10 45XY, rob(13;14)(q11;q11) 1 1p36.33e1q44; 10p15.3e10q26.3; 12p13.33e15q24.33; 19p13.3e19q13.42 5p15.33e5q35.3; 9p24.3e9q34.3; 21q11.2e21q22.3; Yp11.31eYq12 Abnormal 2 Euploid Normal/balanced 11 46XX, t(1;14)(q31;q31) 1 Euploid Normal/balanced 2 1p36.33e1q44; 7p22.3e7q36.3 14q11.2e14q24.3 Abnormal 3 Euploid d Normal/balanced 12 46XY, t(9;12)(q11;q13) 1 16p13.3e16q24.3 d Abnormal 2 10p15.3e10q26.3 d Abnormal 3 Euploid Normal/balanced 4 Euploid Normal/balanced 5 e Yp11.2eYq12 Abnormal 6 1p36.33e1q44; 15q11.1e15q26.3; 18p11.32e18q23 d Abnormal 7 d 12p13.33e12q24.33 Abnormal 8 Euploid Normal/balanced Chr. Z chromosome; rob Z Robertsonian translocation.
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