2. We Monitor Drug Discovery On The Internet, 24/7
Using The Latest Text-Analytics Tools
Science Professionals Use Our Data, Developers Use Our Software
Data
Intelligence
Text
Analysis
SciBite.com
SciBite.com:
A
free
“Twi9er®”
like
news
feed
for
pharma
&
biotech
SciBite
Plus:
A
rich
therapeuCc
intelligence
dashboard
for
scienCfic
&
business
analysts
SciBite
API:
Access
to
a
rich
data
feed
for
data-‐mining
in
target
discovery
and
drug
repurposing
Termite:
A
highly-‐tuned
text-‐mining
engine
for
pharma
and
biotechnology
Termite-‐Search:
Powerful
detecCon
of
biomedical
topics
in
text
Termite-‐Ontologies:
Ontologies
and
text-‐mining
thesauri
for
life
science
industry
3. What is Therapeutic Intelligence?
I
care
about
asthma.
What
does
the
current
landscape
of
(Drugs,
Targets,
Companies,
Trials,
Collabora:ons…)
look
like?
SciBite.com
Well, a bit like this actually >>
4. Coloured
bars
tell
us
type
of
arCcle
(news,
patent,
paper…)
SemanCc
tags
tell
us
exactly
which
topics
menConed,
regardless
of
synonyms
Spikes
when
interesCng
stuff
happening
Never
miss
a
thing,
email
or
RSS
updates
Not
just
“things”,
context
too.
Scibite.com: “.. like Twitter® for Pharma..”
Best of all, its completely free! SciBite.com
5. But That’s Just The Tip Of The Iceberg
Our
database
contains
millions
of
papers,
clinical
trials
summaries,
grants,
patents,
news
arCcles,
blog
posts,
Tweets,
press
releases,
FDA
noCces
and
much
more…
SciBite.com
Interrogate Our Data,
Understand The Landscape >>
6. NewsScape
plot
shows
topic-‐topic
relaConships
by
Cme
and
frequency
InteracCve
charts
highlighCng
hot
targets,
drugs,
companies,
indicaCons
SciBite Plus: Understand & Exploit
The Drug Discovery Landscape
SciBite.com
Commercial
Landscape
map
shows
who’s
working
on
your
target…
for
what.
Target
relaConship
matrix,
find
new
targets
by
precedence
&
Much
More
Coming
Soon…..
8. Termite® The SciBite Text-Mining Engine
SciBite.com
Termite Makes Text-Mining Easy
• Simple architecture, runs on any Unix/Linux/OSX system
• High throughput, easily scaled to process MB of text per second
• “On-demand” and batch-mode processing
• Combines thesauri and algorithms in a best-of-both platform
• Professionally curated modules to identify gene, disease, side effect,
biochemical, companies, procedures, drugs, cells, and many more
Termite Is Uniquely Tuned For Biomedicine
• There are many text-mining tools out there, but none of them provide
the range of capabilities offered by Termite
• While other engines struggle with the ambiguity of everyday
biomedical text, Termite embraces it.
• For example:
• Termite knows when “GSK” means Glucose Synthase Kinase
and when it means GlaxoSmithKline
• Termite knows when “Hedgehog” means the developmental
protein and not the animal
• Termite knows that ERK1/2 means the proteins ERK1 and
ERK2
• Termite knows there are at least five diseases known as “Pick
Disease” and can work out which exact one the text concerns
For
many
more
examples
where
other
engines
fail,
see
our
presentaCon:
h9p://www.slideshare.net/scibitely/termite-‐dealing-‐with-‐real-‐world
9. Try Termite Now!
Go
to
h9p://scibite.com/site/p3/webconnect.html
Then find an article
http://www.ncbi.nlm.nih.gov/pubmed/23144792
Install The Bookmarklet Watch Termite In Action
Internal
installa7on
for
private
documents
is
available
SciBite.com
10. Augmenting Enterprise Search
Document
Repositories
Extracted
Files
Termite
Enhancement
SemanCc
“Tags”
Your
search
tool
here
Generic Search Tools Just Don’t Cut It!
• Standard Enterprise Search systems are
built to serve a wide audience. They can’t
deal with the nuances of biomedicine
• Which means your users get annoyed when
they can’t find the right drug, target or
indication
• Termite can be installed as part of your
indexing workflow, creating rich (and correct)
meta-data that allows users to search more
accurately
• Documents can be extracted and tagged in
batch, or on-the-fly using the Termite-On-
Demand web service
SciBite.com
11. ..
And
Now…
Cell
Line
Species
InvesCgaCve
Procedure
Phenotype
MedDRA
Termite Ontologies & Thesauri
Custom
Ontologies
Created
For
You
Extensive
ontologies
and
thesauri,
curated
by
experts
with
decades
of
drug-‐discovery
experience
SciBite.com