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T                                                                                                    T                                                                                         T
                       1681.8397                                                                                             1681.8397                                                                                 1681.8397
                            5                                                                                                     5                                                                                         5




           T                   T7                                                                                                    T7                                                                                        T7
                                                                                                                 T                                                                                         T
 T                  1481.8099 1995.1389           T                                                                       1481.8099 1995.1389                                                                       1481.8099 1995.1389
                                          T                                                            T                                                       T       T                  37    T                                             T       T                                    37
909.4676                                2495.27912837.3934                                            37
                                                                                                 3519.8990
               12   1492.7842                                                                         909.4676                                                                       3519.8990 909.4676                                                                               3519.8990
                                                                                                                     12                                                                                        12
                                                                                                                                                             2495.27912837.3934                                                             2495.27912837.3934
                                   2298.37632704.3640                                                 61.
                                                                                                 3501.0                   1492.7842                                                       61.
                                                                                                                                                                                     3501.0                         1492.7842                                                              61.
                                                                                                                                                                                                                                                                                      3501.0
 16                                               5
                                                                                                                                                        2298.37632704.3640                                                             2298.37632704.3640
                                           1                                                             16                                                        1                              16                                                      1
                                                                                                 325 14                                                                   5          325 14                                                                             5             325 14
   1000              1500       2000      2500        3000                                        3500
                                                                                                      24 1000              1500               2000                2500        3000    350024        1000             1500       2000                   2500                 3000       350024
                                                                                                                                                                                                                                                                               ISB




                                                                                                                                                                         DIBIP
                                                                                                                                                                                                                                    www.isbiotechnology.com
                                                                                                                                                                                                                                    Via Fantoli 16/15 (Milano)


                                                                                                                                                                                                                                  Director : Dr. Simone Cristoni
                                                                                                                                                                                                                                Mail to : info@isbiotechnology.com




                                                                                                                                      DynamIc BIomarker Profile


                                                        Early stage cancer diagnosis is possible now
                                                                                                                                                                                                                                                                     Ion Source & Biotechnologies




  1
T                                                                T                                                                        T
                       1681.8397                                                         1681.8397                                                                1681.8397
                            5                                                                 5                                                                        5




           T                   T7                                                                T7                                                                       T7
                                                                             T                                                                        T
 T                  1481.8099 1995.1389           T                                   1481.8099 1995.1389                                                      1481.8099 1995.1389
                                          T                        T                                        T       T                37    T                                             T       T                                    37
909.4676                                2495.27912837.3934        37
                                                             3519.8990
               12   1492.7842                                     909.4676                                                      3519.8990 909.4676                                                                               3519.8990
                                                                                 12                                                                       12
                                                                                                          2495.27912837.3934                                                           2495.27912837.3934
                                   2298.37632704.3640             61.
                                                             3501.0                   1492.7842                                      61.
                                                                                                                                3501.0                         1492.7842                                                              61.
                                                                                                                                                                                                                                 3501.0
 16                                               5
                                                                                                     2298.37632704.3640                                                           2298.37632704.3640
                                           1                         16                                      1                               16                                                      1
                                                             325 14                                                  5          325 14                                                                             5             325 14
   1000              1500       2000      2500        3000    3500
                                                                  24 1000              1500       2000      2500         3000    350024        1000             1500       2000                   2500                 3000       350024
                                                                                                                                                                                                                          ISB

                                                                                                                                                                               www.isbiotechnology.com
                                                                                                                                                                               Via Fantoli 16/15 (Milano)


                                                                                                                                                                             Director : Dr. Simone Cristoni
                                                                                                                                                                           Mail to : info@isbiotechnology.com




                                                                                         Open source

                                                                                      metabolic profiling
                                                                                                                                                                                                                Ion Source & Biotechnologies




                                                                             Early stage cancer diagnosis through




  2
Apparatus for early stage cancer Diagnsosis
   DynamIc Biomarker Profile (DIBIP)




                     +                                  +




                                                                     OnLine
                                                                      DIBIP
LC-MS                              USIS                               Data
                                                                   elaboration
                                                                     system
                           References
 1) Cristoni S. et al. Rapid Commun Mass Spectrom. 2009 Sep;23(17):2839-45
         2) Cristoni S. PCT International patent n. (WO 2007/131682)
                                                                                 3
DIBIP data collection and elaboration description


 Creation of different mass spectra library (ex. 2 libraries: controls and patients).
 The mass spectra are inserted in the correct library to create an effective database (to
be enlarged by further insertion of other spectra).
Each mass spectrum represents the entire plasma peptide & metabolite profile of a
person. (*, or an other biological fluid)
 An unknown sample is directly compared with each single profile of the database and it is
automatically allocated in one or in the other library by similarity.
 CONTROLS’ LIBRARY




                                                           PATIENTS’ LIBRARY
                                  UNKNOWN SAMPLE




The whole plasma metabolite profile of an unknown sample is directly
compared with each MS spectrum of both libraries and classified by similarity.


                                                                                        4
DIBIP diagnosis data elaboration flow
  Plasma from        Plasma from        Plasma from
unknown subjects   control subjects   unhealthy patients

   DIBIP data        DIBIP data       DIBIP data

                   Control library
                    Control library   Unhealthy library




                   DIAGNOSIS

                                                   5
Results




94 % of Correct diagnosis!!!!!!!
           Sensitivity: 94%
           Selectivity: 94%
Results




Elaboration platform will be made freely
              available at:

  http://www.isbiotechnology.com/
T                                                                                                                                                                                  T                                                                                                                                                              T
                       1681.8397                                                                                                                                                                           1681.8397                                                                                                                                                      1681.8397
                            5                                                                                                                                                                                      5                                                                                                                                                           5




           T                   T7                                                                                                                                                                            T7                                                                                                                                                                   T7
                                                                                                                                                                                       T                                                                                                                                                                      T
 T                  1481.8099 1995.1389           T                                                                                        T                                                      1481.8099 1995.1389                                                                                                                          T                       1481.8099 1995.1389
                                          T                                                                                               37                                                                                                          T       T                                                                          37                                                  T       T                    37
909.4676       12
                                        2495.27912837.3934                                                                           3519.8990
                                                                                                                                          909.4676                                                                                                                                                                                  3519.8990 909.4676                                                               3519.8990
                    1492.7842                                                                                                                                                              12                                                                                                                                                                     12
                                                                                                                                                                                                                                                    2495.27912837.3934                                                                                                                     2495.27912837.3934
                                   2298.37632704.3640                                                                                     61.
                                                                                                                                     3501.0                                                         1492.7842                                                                                                                            61.
                                                                                                                                                                                                                                                                                                                                    3501.0                             1492.7842                                          61.
                                                                                                                                                                                                                                                                                                                                                                                                                     3501.0
 16                                                                                                    5
                                                                                                                                                                                                                                               2298.37632704.3640                                                                                                                     2298.37632704.3640
                                                                                 1                                                           16                                                                                                                            1                                                                     16                                           1
                                                                                                                                     325 14                                                                                                                                                        5                                325 14                                                             5             325 14
   1000              1500       2000                                      2500                             3000                       3500 1000
                                                                                                                                          24                                                             1500                             2000                        2500                              3000                         350024        1000                 1500       2000      2500          3000       350024




                                                                                                                                                                                                                                                                                                                                                              Team




                                                                                                                                                                                                                                               Dr. Cristina Canton Biologist




                                                                                          Dr. Martina Soldaini Marketing
                                                                                                                                                                        Dr. Ombretta Repetto Biologist
                                                                                                                                                                                                                                                                                                                                                                                                                ISB




                                                                                                                                                                                                           Dr. Alessandro Finiguerra Chemist
                                                                                                                                                                                                                                                                                                                        Dr. Simone Cristoni General Manager
                                                                                                                                                                                                                                                                               Dr. Lorenzo Zingaro Laboratory Manager




                                                                                                                           Dr. Vincenza Flora Dibari Bioinformatician


                                       Dr. Pablo Martínez-Lozano Marie Curie researcher
                                                                                                                                                                                                                                                                                                                                                                                                    Ion Source & Biotechnologies




  8

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Dibip technology

  • 1. T T T 1681.8397 1681.8397 1681.8397 5 5 5 T T7 T7 T7 T T T 1481.8099 1995.1389 T 1481.8099 1995.1389 1481.8099 1995.1389 T T T T 37 T T T 37 909.4676 2495.27912837.3934 37 3519.8990 12 1492.7842 909.4676 3519.8990 909.4676 3519.8990 12 12 2495.27912837.3934 2495.27912837.3934 2298.37632704.3640 61. 3501.0 1492.7842 61. 3501.0 1492.7842 61. 3501.0 16 5 2298.37632704.3640 2298.37632704.3640 1 16 1 16 1 325 14 5 325 14 5 325 14 1000 1500 2000 2500 3000 3500 24 1000 1500 2000 2500 3000 350024 1000 1500 2000 2500 3000 350024 ISB DIBIP www.isbiotechnology.com Via Fantoli 16/15 (Milano) Director : Dr. Simone Cristoni Mail to : info@isbiotechnology.com DynamIc BIomarker Profile Early stage cancer diagnosis is possible now Ion Source & Biotechnologies 1
  • 2. T T T 1681.8397 1681.8397 1681.8397 5 5 5 T T7 T7 T7 T T T 1481.8099 1995.1389 T 1481.8099 1995.1389 1481.8099 1995.1389 T T T T 37 T T T 37 909.4676 2495.27912837.3934 37 3519.8990 12 1492.7842 909.4676 3519.8990 909.4676 3519.8990 12 12 2495.27912837.3934 2495.27912837.3934 2298.37632704.3640 61. 3501.0 1492.7842 61. 3501.0 1492.7842 61. 3501.0 16 5 2298.37632704.3640 2298.37632704.3640 1 16 1 16 1 325 14 5 325 14 5 325 14 1000 1500 2000 2500 3000 3500 24 1000 1500 2000 2500 3000 350024 1000 1500 2000 2500 3000 350024 ISB www.isbiotechnology.com Via Fantoli 16/15 (Milano) Director : Dr. Simone Cristoni Mail to : info@isbiotechnology.com Open source metabolic profiling Ion Source & Biotechnologies Early stage cancer diagnosis through 2
  • 3. Apparatus for early stage cancer Diagnsosis DynamIc Biomarker Profile (DIBIP) + + OnLine DIBIP LC-MS USIS Data elaboration system References 1) Cristoni S. et al. Rapid Commun Mass Spectrom. 2009 Sep;23(17):2839-45 2) Cristoni S. PCT International patent n. (WO 2007/131682) 3
  • 4. DIBIP data collection and elaboration description  Creation of different mass spectra library (ex. 2 libraries: controls and patients).  The mass spectra are inserted in the correct library to create an effective database (to be enlarged by further insertion of other spectra). Each mass spectrum represents the entire plasma peptide & metabolite profile of a person. (*, or an other biological fluid)  An unknown sample is directly compared with each single profile of the database and it is automatically allocated in one or in the other library by similarity. CONTROLS’ LIBRARY PATIENTS’ LIBRARY UNKNOWN SAMPLE The whole plasma metabolite profile of an unknown sample is directly compared with each MS spectrum of both libraries and classified by similarity. 4
  • 5. DIBIP diagnosis data elaboration flow Plasma from Plasma from Plasma from unknown subjects control subjects unhealthy patients DIBIP data DIBIP data DIBIP data Control library Control library Unhealthy library DIAGNOSIS 5
  • 6. Results 94 % of Correct diagnosis!!!!!!! Sensitivity: 94% Selectivity: 94%
  • 7. Results Elaboration platform will be made freely available at: http://www.isbiotechnology.com/
  • 8. T T T 1681.8397 1681.8397 1681.8397 5 5 5 T T7 T7 T7 T T T 1481.8099 1995.1389 T T 1481.8099 1995.1389 T 1481.8099 1995.1389 T 37 T T 37 T T 37 909.4676 12 2495.27912837.3934 3519.8990 909.4676 3519.8990 909.4676 3519.8990 1492.7842 12 12 2495.27912837.3934 2495.27912837.3934 2298.37632704.3640 61. 3501.0 1492.7842 61. 3501.0 1492.7842 61. 3501.0 16 5 2298.37632704.3640 2298.37632704.3640 1 16 1 16 1 325 14 5 325 14 5 325 14 1000 1500 2000 2500 3000 3500 1000 24 1500 2000 2500 3000 350024 1000 1500 2000 2500 3000 350024 Team Dr. Cristina Canton Biologist Dr. Martina Soldaini Marketing Dr. Ombretta Repetto Biologist ISB Dr. Alessandro Finiguerra Chemist Dr. Simone Cristoni General Manager Dr. Lorenzo Zingaro Laboratory Manager Dr. Vincenza Flora Dibari Bioinformatician Dr. Pablo Martínez-Lozano Marie Curie researcher Ion Source & Biotechnologies 8