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Introduction:   The
Scientific Study   Of Life




      Biology          1
Scientific Method



              2
Beginnings
• Aristotle (384 BCE-322 BCE or BC)
• ancient Greek philosopher




                             3
Aristotle
• Aristotle, more than any other thinker,
  determined the orientation and the content of
  Western intellectual history. He was the author
  of a philosophical and scientific system that
  through the centuries became the support and
  vehicle for both medieval Christian and Islamic
  scholastic thought: until the end of the 17 th
  century, Western culture was Aristotelian. And,
  even after the intellectual revolutions of
  centuries to follow, Aristotelian concepts and
  ideas remained embedded in Western thinking.
                                     4
• In other words, Aristotle was so famous
  that his work influenced thinking in the
  Western world from his time to the
  present.
• This was fine when he was right. But
  he was so influential that his mistakes
  were never noticed.




                                 5
• Aristotle and his contemporaries believed
  that all problems could be solved by
  thinking about them.
• Sometimes this worked, other times it did
  not.
• For example, Aristotle thought that heavy
  objects would fall faster than lighter ones.



                                   6
• Now that does seem reasonable at first.
  And this is how “science” was done in
  ancient times.
• But what did Aristotle not do?
• He never tested his ideas!
• The world would have to wait almost
  2000 years for that to happen.



                                 7
Galileo Galilei
•1564-1642 AD or CE
•Lived in what is today Italy
•Is considered to be the
first true scientist.
•Why????
•Because he actually did
the experiment.



                                8
• Aristotle said that heavy objects fall faster
  than lighter ones.
• So Galileo asked, “How much faster?”
• So he sent students up to the top of a
  building and had them drop a heavy ball
  and a lighter one off at the same time. He
  had other students waiting below to
  measure the difference in time between
  the two hitting the ground.


                                    9
• Today of course we know what
  happened. Much to everyone’s surprise
  both balls hit the ground at about the
  same time!
• This shows that it is much preferred to
  test your ideas rather than merely think
  about them.
• One test is worth a thousand expert
  opinions. Bill Nye


                                 10
Key Idea
• When conducting an experiment, change
  one factor and keep everything else
  exactly the same.
• The one thing you change is called the
  variable.
• All the things you keep the same are called
  controls.


                                 11
Galileo’s Experiment
• What was the variable in Galileo’s
  experiment?
• The weight of the balls.
• What were some controls?
• Dropped from same height.
• Dropped at same time.
• Balls had same shape/size.


                                  12
Scientific Method Steps
•   Make an observation
•   State the problem.
•   Make a hypothesis.
•   Conduct the experiment.
•   Record/analyze data.
•   Make a conclusion.
•   Report findings to others so they can repeat
    the experiment.



                                       13
How is biological research done?
           The Scientific Method
        Based on Hypothetic-deductive method




Step to scientific method

1. Making observations about the natural world

2. Asking a question about what you have observed
3. Construct hypotheses that may answer your
  question
                                         14
4. Test the hypothesis by conducting
experiments or making extensive observations
in nature

Organize and collect the data. (charts, graphs,
and tables)
            a. quantitative data- numeric
            values from counting or
            measuring
            b. qualitative data- descriptive
            characteristics

Your experiment will have one independent
variable and one dependent variable


                                              15
Testing your Hypothesis:
           Experiment
• A procedure to test the hypothesis.




                             16
Experiment
Variable – factor in the experiment that is
                being tested




                                 17
Experiment
A good or “valid” experiment will only have
                ONE variable!




                                18
Controls and Variables




                 19
What is the Purpose of a
           Control?

• Controls are NOT being tested
• Controls are used for COMPARISON
• The factor that is changed is known as
  the independent variable .
• The factor that is measured or observed
  is called the dependent variable .


                                20
Independent variable is the variable that is varied or
manipulated by the researcher, and the dependent variable
is the response that is measured.

For example: the independent variable how much
  vitamin C you take can influence life expectancy (dependent
  variable).
• The experiment
             Group One get high doses of vitamin C
             Group Two goes without vitamin C

The scientists will investigate if there is any statistically
significant difference in the life span of the people who took

the high dose and those who took no dose.
                                                 21
5. Draw a conclusion each hypothesis
  based on the results of the experiments/
  observations. Once done you analyze your
  results and state a conclusion

6. If you did not answer you original question
  you…
   Formulate new questions based on what
  you have learned
7. Repeat, repeat, repeat...



                                      22
Review
Variable: the      Data: the         Controls: the
one thing you      information you   parts of the
change in an       get when you      experiment that
experiment.        test the          stay the same.
                   variable.
Manipulated        Responding        Controlling
variable: you      variable:         variables
change this        responds to the
yourself.          change you
                   made.
Independent        Dependant         Controlling
variable: on its   variable:         variables
own.               depends on the
                   change you
                   made.

                                             23
Introduction
• Biology is the scientific study of life

In Latin:
• ‘Bios’ = life
• ‘Logos’ = study of



                                     24
THE
CHARACTERISTICS
    OF LIFE
How we’re different from rocks.

                       25
What makes something alive?
• Biologists sometimes say that living things are
  “organic”. Before we go further, let’s define this
  word.
• The word “organic” sometimes means. . .
  – Raised/grown without pesticides or chemical alterations
  – Containing Carbon


  In biology, it primarily means that
    something is living, or was once living!


                                             26
Scientists have
  found living
 things share
    common
characteristics,
  no matter
   what the
 species. . .

     27
1) Cells: All living things are made of cells

• Unicellular =
  made of one cell
• Multicellular =
  made of 2 or
  more cells




                                 28
29
2) Organization:
•   This organization contributes to their function.
    For instance: A stomach is made of. .
    atoms -> molecules -> cells -> tissues -> organ (stomach)
•      All of the things that come together to form a stomach
    contribute their own functions to the stomach’s function
•   Organs (like the stomach) are organized into organ systems
    (like the digestive system).
•   Organ systems work together to form an organism (like you!).
•   So…the whole story is this:

atoms -> molecules -> cells -> tissues ->
  organs (stomach) -> organ systems -> organism

                                        I’m an
                                        organ!
                                                 30
3) Metabolism: All living things use energy
 • Together, all of the chemical reactions that happen
   in a living organisms make up its METABOLISM.
                                     METABOLISM
 • People take chemical energy (food) and change it
   to heat and mechanical energy
 • Plants take light energy (sun), and change it to
   chemical energy (sugars)




                                         31
4) Homeostasis: Living things
expend energy to maintain a stable
      internal environment.

• Some examples:
  –   Goosebumps
  –   Sweating
  –   Thirst Sensation




                         32
5) Growth and Development




All living things undergo stages of growth and
development, which are determined by their own
genetic codes (DNA).
                                    33
6) Reproduction: All living things reproduce

   • Asexual : Reproduction by splitting or
     budding (1)




   • Sexual : Reproduction involving a male
     and female species(2)           34
To be considered alive, a
 thing must possess ALL of
these 6 characteristics, not
       just some. . . .


                     35
For instance, a
      For instance. . .
 computer. . . .
HAS: organization, uses
 energy, maintains
 homeostasis
                 but. . .
DOESN’T HAVE: cells,
 growth or development, or
 reproduction
                     36
Eight General Life Functions

The processes used to maintain life.




                                       37
1. Respiration
• the process of releasing stored chemical energy
  stored in nutrients, that can be converted to a form
  that can be used directly by the living things.




                                        38
2. Reproduction
• is the process by which living things create a
  new organisms.
• Two Types:
       • Asexual reproduction: single individual
         produces an offspring that is identical to
         the parent.
       • Sexual reproduction: reproduction
         involving two parents producing and off
         spring that is not identical to either parent.




                                          39
• 3. Regulation A response to changes within
  and around the organism.

• 4. Synthesis is the process in which simple
  substances are combined to make complex
  substance needed by the organism. The
  substance can then become part of the body.
  The incorporation of these substances by an
  organism is called assimilation.

* Metabolism: is the process that builds up
  and breaks down complex substances (all
  chemical reaction occurring within the cells of
  an organism are called its metabolism.

                                         40
5. Growth the process by which living
organisms increase cell numbers and cell
size. With increasing cell number comes
cell specialization.

6. Excretion the removal of the waste
  products produced by the organism.

7. Transport the exchange of materials
  form the surrounding environment. In
  small organisms this exchange occurs
  directly with the environment. In large
  organism it occurs within a system
  (example: circulatory)
                                 41
• 8. Nutrition the taking in of material from
  the external environment and turns it into
  substances that can be used by the
  organism for growth and repair.

• Two types:
    •Organisms that produce their own
     complex substances.
    •Organisms that take complex
     substances from the environment.
 Mnemonic device
Running, Resting and Recreation Seldom
  Gave Energy To Nancy
                                   42
Hierarchical organization of Life

 Atom        molecule       cell    tissue

Organism     organ system          organ

Population    community

                Ecosystem


                                   43
Hierarchical organization of Life




                           44
45
Classification




                 46
Classifying life




KINGS PLAY CHESS ON FAT GREEN STOOLS
                         47
The Study of Microbial
Structure: Microscopy
    and Specimen
     Preparation



                   48
Scale




1mm = 1,000um




                49
Discovery of Microorganisms
Antony van Leeuwenhoek (1632-1723)
first person to
observe and
describe
micro-organisms
accurately



                                     50
Types of Microscopes
• Light (compound)
• Electron Microscope
• Scanning Electron Microscope




                                 51
I. Light Microscope
• compound microscopes image formed by
  action of 2 lenses
  Magnification: the ability to make an
   object look larger then actual size.
   On a light microscope this can be up
   to 100X – 100 times larger
  Resolution the measure of clarity of an
    image.
     • The ability to separate two points that
       are close together.


                                     52
Ocular lens
                                                      (Eyepiece)
  Body Tube


  Nosepiece
                                                      Arm
  Objectives

                                                      Stage
 Stage Clips
                                               Coarse Adjustment
 Diaphragm
                                               Fine Adjustment
      Light

                                                      Base
  Always carry a microscope with one hand
holding the arm and one hand under the base.     53
54
What’s my power?
To calculate the power of magnification, multiply the power of
the ocular lens by the power of the objective.



                                    What are the powers of
                                   magnification for each of
                                  the objectives we have on
                                      our microscopes?




                                               55
Lenses
• focus light rays at a specific place called
  the focal point
• distance between center of lens and
  focal point is the focal length

  – short focal length ⇒more magnification




                                             56
focal point




        57
Comparing Powers of Magnification

              We can see better details with higher
              the powers of magnification, but we
              cannot see as much of the image.



Which of these images
would be viewed at a
   higher power of
   magnification?



                                         58
Let’s give it a try ...
1 – Turn on the microscope and then rotate the nosepiece to
click the red-banded objective into place.


2 – Place a slide on the stage and secure it using the stage
clips. Use the coarse adjustment knob (large knob) to get it
the image into view and then use the fine adjustment knob
(small knob) to make it clearer.

3 – Once you have the image in view, rotate the nosepiece to
view it under different powers.
     Be careful with the largest objective! Sometimes there is
     not enough room and you will not be able to use it!
                                                 59
4 – When you are done, turn off the
  microscope and put up the slides
  you used.




                           60
61
Preparation and Staining of Specimens

 •increases visibility of specimen
 •making the internal and external
 structures of cell more visible by
 increasing contrast with background that
 have two common features


 *We will use a wet mount technique to
 stain our specimens


                                62
Example: of a Staining
techniques
• Gram stain divides microorganisms into groups based on
  their staining properties




                                          63
primary
         stain


        mordant




 decolorization

     counterstain
positive
negative
       64
How to make a wet-mount slide …
1 – Get a clean slide and coverslip from your teacher.
2 – Place ONE drop of water in the middle of the slide.
Don’t use too much or the water will run off the edge and
make a mess!
3 – Place the edge of the cover slip on one side of the water
drop.




                                               65
4 - Slowly lower the cover slip on top of the drop .
                     Cover         Lower slowly
                      Slip




 5 – Place the slide on the stage and view it first with the
 red-banded objective. Once you see the image, you can
 rotate the nosepiece to view the slide with the different
 objectives.
    You do not need to use the stage clips when
            viewing wet-mount slides!


                                                  66
II. Electron Microscopy
• beams of electrons
  are used to produce
  images
• wavelength of
  electron beam is
  much shorter than
  light, resulting in
  much higher
  resolution


                        67
a. An image is formed by passing a beam of
  electrons (-) over the surface or through a
  specimen.
b. Can be magnified over 200,000X
c. Cannot view living specimens.
   • Operates in a vacuum
   • Specimen are dehydrated and/ or coated
     in metal.



                                   68
Electron Microscope




                69
Fly head




           70
Surface of a fruit fly eye




                     71
III. Scanning Electron Microscope

  • uses electrons reflected from the
    surface of a specimen to create image
  • produces a 3-dimensional image of
    specimen’s surface features




                                 72
Fly head




           73

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The Scientific Study of Life: Aristotle, Galileo, and the Scientific Method

  • 1. Introduction: The Scientific Study Of Life Biology 1
  • 3. Beginnings • Aristotle (384 BCE-322 BCE or BC) • ancient Greek philosopher 3
  • 4. Aristotle • Aristotle, more than any other thinker, determined the orientation and the content of Western intellectual history. He was the author of a philosophical and scientific system that through the centuries became the support and vehicle for both medieval Christian and Islamic scholastic thought: until the end of the 17 th century, Western culture was Aristotelian. And, even after the intellectual revolutions of centuries to follow, Aristotelian concepts and ideas remained embedded in Western thinking. 4
  • 5. • In other words, Aristotle was so famous that his work influenced thinking in the Western world from his time to the present. • This was fine when he was right. But he was so influential that his mistakes were never noticed. 5
  • 6. • Aristotle and his contemporaries believed that all problems could be solved by thinking about them. • Sometimes this worked, other times it did not. • For example, Aristotle thought that heavy objects would fall faster than lighter ones. 6
  • 7. • Now that does seem reasonable at first. And this is how “science” was done in ancient times. • But what did Aristotle not do? • He never tested his ideas! • The world would have to wait almost 2000 years for that to happen. 7
  • 8. Galileo Galilei •1564-1642 AD or CE •Lived in what is today Italy •Is considered to be the first true scientist. •Why???? •Because he actually did the experiment. 8
  • 9. • Aristotle said that heavy objects fall faster than lighter ones. • So Galileo asked, “How much faster?” • So he sent students up to the top of a building and had them drop a heavy ball and a lighter one off at the same time. He had other students waiting below to measure the difference in time between the two hitting the ground. 9
  • 10. • Today of course we know what happened. Much to everyone’s surprise both balls hit the ground at about the same time! • This shows that it is much preferred to test your ideas rather than merely think about them. • One test is worth a thousand expert opinions. Bill Nye 10
  • 11. Key Idea • When conducting an experiment, change one factor and keep everything else exactly the same. • The one thing you change is called the variable. • All the things you keep the same are called controls. 11
  • 12. Galileo’s Experiment • What was the variable in Galileo’s experiment? • The weight of the balls. • What were some controls? • Dropped from same height. • Dropped at same time. • Balls had same shape/size. 12
  • 13. Scientific Method Steps • Make an observation • State the problem. • Make a hypothesis. • Conduct the experiment. • Record/analyze data. • Make a conclusion. • Report findings to others so they can repeat the experiment. 13
  • 14. How is biological research done? The Scientific Method Based on Hypothetic-deductive method Step to scientific method 1. Making observations about the natural world 2. Asking a question about what you have observed 3. Construct hypotheses that may answer your question 14
  • 15. 4. Test the hypothesis by conducting experiments or making extensive observations in nature Organize and collect the data. (charts, graphs, and tables) a. quantitative data- numeric values from counting or measuring b. qualitative data- descriptive characteristics Your experiment will have one independent variable and one dependent variable 15
  • 16. Testing your Hypothesis: Experiment • A procedure to test the hypothesis. 16
  • 17. Experiment Variable – factor in the experiment that is being tested 17
  • 18. Experiment A good or “valid” experiment will only have ONE variable! 18
  • 20. What is the Purpose of a Control? • Controls are NOT being tested • Controls are used for COMPARISON • The factor that is changed is known as the independent variable . • The factor that is measured or observed is called the dependent variable . 20
  • 21. Independent variable is the variable that is varied or manipulated by the researcher, and the dependent variable is the response that is measured. For example: the independent variable how much vitamin C you take can influence life expectancy (dependent variable). • The experiment Group One get high doses of vitamin C Group Two goes without vitamin C The scientists will investigate if there is any statistically significant difference in the life span of the people who took the high dose and those who took no dose. 21
  • 22. 5. Draw a conclusion each hypothesis based on the results of the experiments/ observations. Once done you analyze your results and state a conclusion 6. If you did not answer you original question you… Formulate new questions based on what you have learned 7. Repeat, repeat, repeat... 22
  • 23. Review Variable: the Data: the Controls: the one thing you information you parts of the change in an get when you experiment that experiment. test the stay the same. variable. Manipulated Responding Controlling variable: you variable: variables change this responds to the yourself. change you made. Independent Dependant Controlling variable: on its variable: variables own. depends on the change you made. 23
  • 24. Introduction • Biology is the scientific study of life In Latin: • ‘Bios’ = life • ‘Logos’ = study of 24
  • 25. THE CHARACTERISTICS OF LIFE How we’re different from rocks. 25
  • 26. What makes something alive? • Biologists sometimes say that living things are “organic”. Before we go further, let’s define this word. • The word “organic” sometimes means. . . – Raised/grown without pesticides or chemical alterations – Containing Carbon In biology, it primarily means that something is living, or was once living! 26
  • 27. Scientists have found living things share common characteristics, no matter what the species. . . 27
  • 28. 1) Cells: All living things are made of cells • Unicellular = made of one cell • Multicellular = made of 2 or more cells 28
  • 29. 29
  • 30. 2) Organization: • This organization contributes to their function. For instance: A stomach is made of. . atoms -> molecules -> cells -> tissues -> organ (stomach) • All of the things that come together to form a stomach contribute their own functions to the stomach’s function • Organs (like the stomach) are organized into organ systems (like the digestive system). • Organ systems work together to form an organism (like you!). • So…the whole story is this: atoms -> molecules -> cells -> tissues -> organs (stomach) -> organ systems -> organism I’m an organ! 30
  • 31. 3) Metabolism: All living things use energy • Together, all of the chemical reactions that happen in a living organisms make up its METABOLISM. METABOLISM • People take chemical energy (food) and change it to heat and mechanical energy • Plants take light energy (sun), and change it to chemical energy (sugars) 31
  • 32. 4) Homeostasis: Living things expend energy to maintain a stable internal environment. • Some examples: – Goosebumps – Sweating – Thirst Sensation 32
  • 33. 5) Growth and Development All living things undergo stages of growth and development, which are determined by their own genetic codes (DNA). 33
  • 34. 6) Reproduction: All living things reproduce • Asexual : Reproduction by splitting or budding (1) • Sexual : Reproduction involving a male and female species(2) 34
  • 35. To be considered alive, a thing must possess ALL of these 6 characteristics, not just some. . . . 35
  • 36. For instance, a For instance. . . computer. . . . HAS: organization, uses energy, maintains homeostasis but. . . DOESN’T HAVE: cells, growth or development, or reproduction 36
  • 37. Eight General Life Functions The processes used to maintain life. 37
  • 38. 1. Respiration • the process of releasing stored chemical energy stored in nutrients, that can be converted to a form that can be used directly by the living things. 38
  • 39. 2. Reproduction • is the process by which living things create a new organisms. • Two Types: • Asexual reproduction: single individual produces an offspring that is identical to the parent. • Sexual reproduction: reproduction involving two parents producing and off spring that is not identical to either parent. 39
  • 40. • 3. Regulation A response to changes within and around the organism. • 4. Synthesis is the process in which simple substances are combined to make complex substance needed by the organism. The substance can then become part of the body. The incorporation of these substances by an organism is called assimilation. * Metabolism: is the process that builds up and breaks down complex substances (all chemical reaction occurring within the cells of an organism are called its metabolism. 40
  • 41. 5. Growth the process by which living organisms increase cell numbers and cell size. With increasing cell number comes cell specialization. 6. Excretion the removal of the waste products produced by the organism. 7. Transport the exchange of materials form the surrounding environment. In small organisms this exchange occurs directly with the environment. In large organism it occurs within a system (example: circulatory) 41
  • 42. • 8. Nutrition the taking in of material from the external environment and turns it into substances that can be used by the organism for growth and repair. • Two types: •Organisms that produce their own complex substances. •Organisms that take complex substances from the environment. Mnemonic device Running, Resting and Recreation Seldom Gave Energy To Nancy 42
  • 43. Hierarchical organization of Life Atom molecule cell tissue Organism organ system organ Population community Ecosystem 43
  • 45. 45
  • 47. Classifying life KINGS PLAY CHESS ON FAT GREEN STOOLS 47
  • 48. The Study of Microbial Structure: Microscopy and Specimen Preparation 48
  • 50. Discovery of Microorganisms Antony van Leeuwenhoek (1632-1723) first person to observe and describe micro-organisms accurately 50
  • 51. Types of Microscopes • Light (compound) • Electron Microscope • Scanning Electron Microscope 51
  • 52. I. Light Microscope • compound microscopes image formed by action of 2 lenses Magnification: the ability to make an object look larger then actual size. On a light microscope this can be up to 100X – 100 times larger Resolution the measure of clarity of an image. • The ability to separate two points that are close together. 52
  • 53. Ocular lens (Eyepiece) Body Tube Nosepiece Arm Objectives Stage Stage Clips Coarse Adjustment Diaphragm Fine Adjustment Light Base Always carry a microscope with one hand holding the arm and one hand under the base. 53
  • 54. 54
  • 55. What’s my power? To calculate the power of magnification, multiply the power of the ocular lens by the power of the objective. What are the powers of magnification for each of the objectives we have on our microscopes? 55
  • 56. Lenses • focus light rays at a specific place called the focal point • distance between center of lens and focal point is the focal length – short focal length ⇒more magnification 56
  • 58. Comparing Powers of Magnification We can see better details with higher the powers of magnification, but we cannot see as much of the image. Which of these images would be viewed at a higher power of magnification? 58
  • 59. Let’s give it a try ... 1 – Turn on the microscope and then rotate the nosepiece to click the red-banded objective into place. 2 – Place a slide on the stage and secure it using the stage clips. Use the coarse adjustment knob (large knob) to get it the image into view and then use the fine adjustment knob (small knob) to make it clearer. 3 – Once you have the image in view, rotate the nosepiece to view it under different powers. Be careful with the largest objective! Sometimes there is not enough room and you will not be able to use it! 59
  • 60. 4 – When you are done, turn off the microscope and put up the slides you used. 60
  • 61. 61
  • 62. Preparation and Staining of Specimens •increases visibility of specimen •making the internal and external structures of cell more visible by increasing contrast with background that have two common features *We will use a wet mount technique to stain our specimens 62
  • 63. Example: of a Staining techniques • Gram stain divides microorganisms into groups based on their staining properties 63
  • 64. primary stain mordant decolorization counterstain positive negative 64
  • 65. How to make a wet-mount slide … 1 – Get a clean slide and coverslip from your teacher. 2 – Place ONE drop of water in the middle of the slide. Don’t use too much or the water will run off the edge and make a mess! 3 – Place the edge of the cover slip on one side of the water drop. 65
  • 66. 4 - Slowly lower the cover slip on top of the drop . Cover Lower slowly Slip 5 – Place the slide on the stage and view it first with the red-banded objective. Once you see the image, you can rotate the nosepiece to view the slide with the different objectives. You do not need to use the stage clips when viewing wet-mount slides! 66
  • 67. II. Electron Microscopy • beams of electrons are used to produce images • wavelength of electron beam is much shorter than light, resulting in much higher resolution 67
  • 68. a. An image is formed by passing a beam of electrons (-) over the surface or through a specimen. b. Can be magnified over 200,000X c. Cannot view living specimens. • Operates in a vacuum • Specimen are dehydrated and/ or coated in metal. 68
  • 70. Fly head 70
  • 71. Surface of a fruit fly eye 71
  • 72. III. Scanning Electron Microscope • uses electrons reflected from the surface of a specimen to create image • produces a 3-dimensional image of specimen’s surface features 72
  • 73. Fly head 73

Notes de l'éditeur

  1. Fly head