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Combating Antimicrobial Resistance: 
The Way Forward 
James M. Hughes, MD 
Professor of Medicine and Public Health 
Emory University 
Atlanta, GA 
NIAA Antibiotic Symposium 
November 14, 2014
Disclosure 
No conflicts with this presentation
OUTLINE 
 The Problem 
 The Challenges 
 The Opportunities
IOM Definition of Emerging Infections 
New, reemerging or 
drug-resistant 
infections whose 
incidence in humans 
has increased within 
the past two decades 
or whose incidence 
threatens to increase 
in the near future. 
1992 
The Problem
Table. Factors contributing to the emergence of infectious 
diseases according to IOM reports, 1992 and 2003 
1992 IOM Report 2003 IOM Report 
Human demographics and 
Human susceptibility to 
behavior 
infection 
Technology and industry Climate and weather 
Economic development and 
land use 
Changing ecosystems 
International travel and 
commerce 
Poverty and social inequality 
Microbial adaptation and 
change 
War and famine 
Breakdown of public health 
measures 
Lack of political will 
Intent to harm 
*Boldface indicates factors that contributed to the emergence 
and spread of antimicrobial resistance.
The Washington Post 
March 16, 1993 
“In 2002, out of 
89 new drugs, no 
new antibiotics 
were approved.”
The Challenges 
Public Health Surveillance 
 Ongoing, systematic collection, analysis, 
and interpretation of outcome-specific data 
 Closely integrated with the timely 
dissemination of these data to those 
responsible for taking public health action 
to prevent and control disease or injury 
Thacker SB. In: Principles and Practices of 
Public Health Surveillance. New York: 
Oxford University Press, 2000.
Resistance 
World Health Day 
April 7, 2011 
Market Failure Innovation Gap 
ESKAPE Bugs 
Bad Bugs / No Drugs 
“10 x ‘20” 
“No Action Today, 
No Cure Tomorrow” 
BMJ 2010;340:1115-18 
% 
Drug Approvals 
# 
Combating Antimicrobial Resistance: 
Policy Recommendations to Save Lives
CDC AR Threats 
Urgent Threats (3) 
• C. difficile 
• CRE 
• Resistant N. gonorrhoeae 
Serious Threats (12) 
• MDR Acinetobacter 
• ESBLs 
• MDR P. aeruginosa 
• VRE 
• MRSA 
• Drug-resistant S. pneumoniae, NT 
Salmonella, Campylobacter 
Concerning Threats (3) 
• VRSA 
• Erythro-res GAS 
• Clinda-res GBS 
http://www.cdc.gov/drugresistance/threat-report-2013/
WHO AR Priorities 
Priority Pathogens 
• E. coli res to 3rd gen cephalosporins 
& FQs 
• K. pneumoniae res to 3rd gen 
cephalosporins & carbapenems 
• MRSA 
• Pcn-resistant S. pneumoniae 
• FQ-resistant Salmonella 
• FQ-resistant Shigella 
• N. gonorrhoeae with decreased 
suscept to 3rd gen cephalosporins 
http://www.who.int/drugresistance/documents/surveillancereport/en/
“A robust public health 
system— in its science, 
capacity, practice, and 
through its collaborations 
with clinical and veterinary 
medicine, academia, 
industry and other public 
and private partners—is the 
best defense against any 
microbial threat.” 2003
IOM Forum on Microbial Threats 
2010 2012 
Antibiotics as a Global Public Good
Microbial Adaptation and Change 
THE NEW YORKER, January 12, 1998 “10 x 20”
IDSA AR Priorities 
 Drug Development Pipeline 
 Bad Bugs, No Drugs 
 “10 by 20” 
 Increased Support for Basic and Translational 
Research 
 Rapid Point of Case Diagnostics 
 Surveillance of Use & Resistance 
 Humans and Animals 
 Antimicrobial Stewardship 
 Regulatory Reform for Clinical Trial Design and 
New Antibacterial Drug Approval
Combating Antimicrobial Resistance: 
Policy Recommendations to Save Lives 
 Economic Incentives 
 New Regulatory Approaches 
 Stronger Leadership and Improved 
Coordination of Federal Agencies 
 Enhanced Surveillance Systems 
 Strengthened Prevention & Control 
Programs 
 Funds for New Drug R & D 
 Rapid Diagnostics R & D 
 Elimination of Non-Judicious Use in 
Animals, Plants, & Marine 
Environments 
IDSA Clin Inf Dis 2011;52(Suppl 5):S397-428
Preventing Antimicrobial Resistance in 
Healthcare Settings and the Community
Core Elements 
• Leadership commitment 
• Accountability (single 
leader) 
• Drug expertise 
(pharmacist) 
• Action (recommendation 
implementation) 
• Surveillance (usage and 
resistance 
• Education (prescribers) 
• Data sharing
Game Changers 
 Culture Independent Diagnostic Testing 
 Whole Genome Sequencing 
 Bioinformatics 
 Healthcare Reform 
 Electronic Health Records 
 Social Media 
 One Health
The Opportunities 
“One Health” 
Humans 
Domestic 
Animals 
Ecosystems 
Wildlife 
http://www.onehealthcommission.org/
Common Ground for Medical and 
Veterinary Communities 
 Antimicrobial resistance and usage 
 Avian, animal, and pandemic influenza 
 Other zoonotic diseases including those 
associated with exotic pet and wildlife trade 
 Foodborne disease 
 Healthcare-associated infections 
 Blood, organ, tissue safety 
 Pathogen discovery / new diagnostics 
 Drug and vaccine development 
 Disease eradication 
 Biosafety / Biosecurity 
 Bioterrorism / Biodefense
President Obama 
Executive Order 
Combating Antibiotic-Resistant Bacteria 
9/18/14 
 National Security Priority 
 Interagency Task Force 
 Co-chairs: Secretaries of HHS, USDA, DoD 
 5 year National Action Plan by 2/15/15 
 Presidential Advisory Council 
 Stewardship (humans & animals) 
 Surveillance (repositories, curated genomic databases) 
 Outbreak Response 
 New Drugs 
 Rapid Diagnostics 
 Increased International Cooperation
National Strategy on 
Combating Antibiotic-Resistant Bacteria 
White House 
September 2014 
Goals 
• Slow emergence / prevent spread 
• Strengthen “One Health” surveillance 
• Develop rapid diagnostics* 
• Accelerate basic and applied R&D 
• New antibiotics 
• Other therapeutics 
• Vaccines 
• Improve international collaboration 
*$20M prize for rapid PoC diagnostic for “highly resistant bacterial 
infections”, co-sponsored by BARDA & NIAID 
http://www.whitehouse.gov/sites/default/files/docs/carb_national_strategy.pdf
Report to The President on 
Combating Antibiotic-Resistant Bacteria 
PCAST 
September 2014 
Problem 
• ~ 2M infections, 23K deaths 
• $55 – 70B in direct & indirect costs 
Recommendations 
• Strong federal leadership 
• Effective surveillance & response 
• Genomics component 
• Expanded fundamental research 
• Robust clinical trial infrastructure & new 
regulatory pathways 
• Economic incentives for drug development, 
stewardship programs, & rapid diagnostics 
• Decreased use in animal agriculture 
• Ensure international co-operation 
http://www.whitehouse.gov/sites/default/files/microsites/ostp/PCAST/pcast_carb_report_sept2014.pdf
Ways Forward For Shared Stewardship 
• Replace the use of antibiotics when possible 
– Human medicine 
• Prevention—vaccination, infection control, preventive 
medicine 
– Animal medicine and agriculture 
• Vaccines, immunomodulators, farming practices
Ways Forward For Shared Stewardship 
• Reduce the use of antibiotics when possible 
– Human medicine 
• Stewardship programs in healthcare—e.g., automatic 
stop orders 
• Outpatient physician feedback and prescriber 
education—e.g., reduce prescribing for URT infections 
– Animal medicine and agriculture 
• Eliminate use of medically important antibiotics for 
growth promotion
Ways Forward For Shared Stewardship 
• Refine the use of antibiotics 
– Human medicine 
• Right drug, right dose, right duration 
• NHSN antibiotic use monitoring as a quality measure 
– Animal medicine and agriculture 
• Require veterinary oversight 
• Decrease use of critically important antibiotics 
• Monitor use in animal agriculture, including 
development of metrics
Needs for Moving Forward on 
Shared Stewardship 
• Shared commitment 
– Continuing dialogue, willingness to listen 
• Better data on use for humans and animals 
– Partnership between USDA, FDA and CDC 
(equivalent of NARMS for antibiotic usage) in 
collaboration with healthcare and food and 
pharmaceutical industries
Needs for Moving Forward on 
Shared Stewardship 
• Communication 
• Adopting a One-Health approach 
• Developing a shared language for human and 
veterinary medicine, industry, consumers, advocates 
• Research 
• Better quantitation of the relationship between 
agricultural use and resistance in human infections 
• Alternatives to antibiotic use in human and veterinary 
medicine and agriculture1 
• Better ways to implement stewardship in human 
medicine 
1. PCAST report, 
http://www.whitehouse.gov/sites/default/files/microsites/ostp/PCAST/pcast_carb_report_sept2014.pdf
Transatlantic Task Force on 
Antimicrobial Resistance 
• Activity #18: Establish a joint working group of 
international subject matter experts to identify key 
knowledge gaps in understanding the transmission to 
man of antimicrobial resistance arising as a result of 
the use of antimicrobial drugs in animals and on the 
development of effective intervention measures to 
prevent this transmission, including the development 
of alternatives to antimicrobial drugs. 
http://www.cdc.gov/drugresistance/pdf/TATFAR-Progress_report_2014.pdf page 17
Conclusions 
 Move beyond “the blame game” 
 Respond to and leverage Executive Order, CARB 
National Strategy, and PCAST recommendations 
 Identify priorities and develop metrics 
 Shared commitment to antimicrobial stewardship 
 Shared commitment to development of better data on 
usage and resistance in various settings 
 Development of a collaborative research agenda to 
improve evidence base 
 Shared commitment to communication and 
collaboration with professional societies public / 
private sector partners, and the public
Acknowledgements 
Emory 
Dianne Miller 
Samantha Lammie 
CDC 
Steve Solomon 
Rob Tauxe 
Jeff Morelli

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Dr. James Hughes - Combating Antimicrobial Resistance: The Way Forward

  • 1. Combating Antimicrobial Resistance: The Way Forward James M. Hughes, MD Professor of Medicine and Public Health Emory University Atlanta, GA NIAA Antibiotic Symposium November 14, 2014
  • 2. Disclosure No conflicts with this presentation
  • 3. OUTLINE  The Problem  The Challenges  The Opportunities
  • 4. IOM Definition of Emerging Infections New, reemerging or drug-resistant infections whose incidence in humans has increased within the past two decades or whose incidence threatens to increase in the near future. 1992 The Problem
  • 5. Table. Factors contributing to the emergence of infectious diseases according to IOM reports, 1992 and 2003 1992 IOM Report 2003 IOM Report Human demographics and Human susceptibility to behavior infection Technology and industry Climate and weather Economic development and land use Changing ecosystems International travel and commerce Poverty and social inequality Microbial adaptation and change War and famine Breakdown of public health measures Lack of political will Intent to harm *Boldface indicates factors that contributed to the emergence and spread of antimicrobial resistance.
  • 6. The Washington Post March 16, 1993 “In 2002, out of 89 new drugs, no new antibiotics were approved.”
  • 7.
  • 8. The Challenges Public Health Surveillance  Ongoing, systematic collection, analysis, and interpretation of outcome-specific data  Closely integrated with the timely dissemination of these data to those responsible for taking public health action to prevent and control disease or injury Thacker SB. In: Principles and Practices of Public Health Surveillance. New York: Oxford University Press, 2000.
  • 9. Resistance World Health Day April 7, 2011 Market Failure Innovation Gap ESKAPE Bugs Bad Bugs / No Drugs “10 x ‘20” “No Action Today, No Cure Tomorrow” BMJ 2010;340:1115-18 % Drug Approvals # Combating Antimicrobial Resistance: Policy Recommendations to Save Lives
  • 10. CDC AR Threats Urgent Threats (3) • C. difficile • CRE • Resistant N. gonorrhoeae Serious Threats (12) • MDR Acinetobacter • ESBLs • MDR P. aeruginosa • VRE • MRSA • Drug-resistant S. pneumoniae, NT Salmonella, Campylobacter Concerning Threats (3) • VRSA • Erythro-res GAS • Clinda-res GBS http://www.cdc.gov/drugresistance/threat-report-2013/
  • 11. WHO AR Priorities Priority Pathogens • E. coli res to 3rd gen cephalosporins & FQs • K. pneumoniae res to 3rd gen cephalosporins & carbapenems • MRSA • Pcn-resistant S. pneumoniae • FQ-resistant Salmonella • FQ-resistant Shigella • N. gonorrhoeae with decreased suscept to 3rd gen cephalosporins http://www.who.int/drugresistance/documents/surveillancereport/en/
  • 12. “A robust public health system— in its science, capacity, practice, and through its collaborations with clinical and veterinary medicine, academia, industry and other public and private partners—is the best defense against any microbial threat.” 2003
  • 13. IOM Forum on Microbial Threats 2010 2012 Antibiotics as a Global Public Good
  • 14. Microbial Adaptation and Change THE NEW YORKER, January 12, 1998 “10 x 20”
  • 15. IDSA AR Priorities  Drug Development Pipeline  Bad Bugs, No Drugs  “10 by 20”  Increased Support for Basic and Translational Research  Rapid Point of Case Diagnostics  Surveillance of Use & Resistance  Humans and Animals  Antimicrobial Stewardship  Regulatory Reform for Clinical Trial Design and New Antibacterial Drug Approval
  • 16. Combating Antimicrobial Resistance: Policy Recommendations to Save Lives  Economic Incentives  New Regulatory Approaches  Stronger Leadership and Improved Coordination of Federal Agencies  Enhanced Surveillance Systems  Strengthened Prevention & Control Programs  Funds for New Drug R & D  Rapid Diagnostics R & D  Elimination of Non-Judicious Use in Animals, Plants, & Marine Environments IDSA Clin Inf Dis 2011;52(Suppl 5):S397-428
  • 17. Preventing Antimicrobial Resistance in Healthcare Settings and the Community
  • 18. Core Elements • Leadership commitment • Accountability (single leader) • Drug expertise (pharmacist) • Action (recommendation implementation) • Surveillance (usage and resistance • Education (prescribers) • Data sharing
  • 19. Game Changers  Culture Independent Diagnostic Testing  Whole Genome Sequencing  Bioinformatics  Healthcare Reform  Electronic Health Records  Social Media  One Health
  • 20. The Opportunities “One Health” Humans Domestic Animals Ecosystems Wildlife http://www.onehealthcommission.org/
  • 21. Common Ground for Medical and Veterinary Communities  Antimicrobial resistance and usage  Avian, animal, and pandemic influenza  Other zoonotic diseases including those associated with exotic pet and wildlife trade  Foodborne disease  Healthcare-associated infections  Blood, organ, tissue safety  Pathogen discovery / new diagnostics  Drug and vaccine development  Disease eradication  Biosafety / Biosecurity  Bioterrorism / Biodefense
  • 22. President Obama Executive Order Combating Antibiotic-Resistant Bacteria 9/18/14  National Security Priority  Interagency Task Force  Co-chairs: Secretaries of HHS, USDA, DoD  5 year National Action Plan by 2/15/15  Presidential Advisory Council  Stewardship (humans & animals)  Surveillance (repositories, curated genomic databases)  Outbreak Response  New Drugs  Rapid Diagnostics  Increased International Cooperation
  • 23. National Strategy on Combating Antibiotic-Resistant Bacteria White House September 2014 Goals • Slow emergence / prevent spread • Strengthen “One Health” surveillance • Develop rapid diagnostics* • Accelerate basic and applied R&D • New antibiotics • Other therapeutics • Vaccines • Improve international collaboration *$20M prize for rapid PoC diagnostic for “highly resistant bacterial infections”, co-sponsored by BARDA & NIAID http://www.whitehouse.gov/sites/default/files/docs/carb_national_strategy.pdf
  • 24. Report to The President on Combating Antibiotic-Resistant Bacteria PCAST September 2014 Problem • ~ 2M infections, 23K deaths • $55 – 70B in direct & indirect costs Recommendations • Strong federal leadership • Effective surveillance & response • Genomics component • Expanded fundamental research • Robust clinical trial infrastructure & new regulatory pathways • Economic incentives for drug development, stewardship programs, & rapid diagnostics • Decreased use in animal agriculture • Ensure international co-operation http://www.whitehouse.gov/sites/default/files/microsites/ostp/PCAST/pcast_carb_report_sept2014.pdf
  • 25. Ways Forward For Shared Stewardship • Replace the use of antibiotics when possible – Human medicine • Prevention—vaccination, infection control, preventive medicine – Animal medicine and agriculture • Vaccines, immunomodulators, farming practices
  • 26. Ways Forward For Shared Stewardship • Reduce the use of antibiotics when possible – Human medicine • Stewardship programs in healthcare—e.g., automatic stop orders • Outpatient physician feedback and prescriber education—e.g., reduce prescribing for URT infections – Animal medicine and agriculture • Eliminate use of medically important antibiotics for growth promotion
  • 27. Ways Forward For Shared Stewardship • Refine the use of antibiotics – Human medicine • Right drug, right dose, right duration • NHSN antibiotic use monitoring as a quality measure – Animal medicine and agriculture • Require veterinary oversight • Decrease use of critically important antibiotics • Monitor use in animal agriculture, including development of metrics
  • 28. Needs for Moving Forward on Shared Stewardship • Shared commitment – Continuing dialogue, willingness to listen • Better data on use for humans and animals – Partnership between USDA, FDA and CDC (equivalent of NARMS for antibiotic usage) in collaboration with healthcare and food and pharmaceutical industries
  • 29. Needs for Moving Forward on Shared Stewardship • Communication • Adopting a One-Health approach • Developing a shared language for human and veterinary medicine, industry, consumers, advocates • Research • Better quantitation of the relationship between agricultural use and resistance in human infections • Alternatives to antibiotic use in human and veterinary medicine and agriculture1 • Better ways to implement stewardship in human medicine 1. PCAST report, http://www.whitehouse.gov/sites/default/files/microsites/ostp/PCAST/pcast_carb_report_sept2014.pdf
  • 30. Transatlantic Task Force on Antimicrobial Resistance • Activity #18: Establish a joint working group of international subject matter experts to identify key knowledge gaps in understanding the transmission to man of antimicrobial resistance arising as a result of the use of antimicrobial drugs in animals and on the development of effective intervention measures to prevent this transmission, including the development of alternatives to antimicrobial drugs. http://www.cdc.gov/drugresistance/pdf/TATFAR-Progress_report_2014.pdf page 17
  • 31. Conclusions  Move beyond “the blame game”  Respond to and leverage Executive Order, CARB National Strategy, and PCAST recommendations  Identify priorities and develop metrics  Shared commitment to antimicrobial stewardship  Shared commitment to development of better data on usage and resistance in various settings  Development of a collaborative research agenda to improve evidence base  Shared commitment to communication and collaboration with professional societies public / private sector partners, and the public
  • 32. Acknowledgements Emory Dianne Miller Samantha Lammie CDC Steve Solomon Rob Tauxe Jeff Morelli