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genomicsandhealth.org
Bartha M. Knoppers
Director of the Centre of Genomics and Policy, McGill
Chair, GA4GH Regulatory and Ethics Working Group
Canada Research Chair in Law and Medicine
Adrian Thorogood
Academic Associate, Centre of Genomics and Policy. McGill
Coordinator, GA4GH Regulatory and Ethics Working Group
Use of open, curated variant databases:
Ethics? Liability?
genomicsandhealth.org
genomicsandhealth.org
Mission
To accelerate progress in human health
by helping to establish a common framework of
harmonized approaches to enable effective and
responsible sharing of genomic and clinical data, and by
catalyzing data sharing projects that drive and
demonstrate the value of data sharing
genomicsandhealth.org
GA4GH Framework for Responsible
Sharing of Genomic and Health-Related
Data
4
• Current frameworks are founded on the principle of protection
from harm. In contrast,
• GA4GH Framework aims to activate the right to science and
the right to recognition for scientific production by promoting
responsible data sharing.
http://genomicsandhealth.org/framework
genomicsandhealth.org
Human Rights Foundation
Universal Declaration of Human Rights, (1948)
5
“The Right to Science”
“Everyone has the right to the
protection of the moral and
material interests resulting from
any scientific, literary or artistic
production of which he is the
author.”
“Everyone has the right freely
to participate in the cultural
life of the community, to
enjoy the arts and to share in
scientific advancement and its
benefits.”
27(1) 27(2)
“The Right to
Recognition”
genomicsandhealth.org
Framework for Responsible Sharing of Genomic
and Health-Related Data
6
The Framework is currently available in 12 languages. Thank you to all the volunteers!
• Arabic
• Chinese
• French
• German
• Greek
• Hindi
• Italian
• Japanese
• Portuguese
• Spanish
• Russian
Πλαίσιο για την Υπεύθυνη Κοινοχρησία Γονιδιωματικών και άλλων Ιατρικών
Δεδομένων
基因组学与健康相关数据负责任的共享框架
‫بالصحة‬ ‫والمتصلة‬ ‫الجینومیة‬ ‫للمعلومات‬ ‫مسؤول‬ ‫لتبادل‬ ‫إطار‬
Cadre pour un partage responsable des données génomiques et des données de santé
ゲノム及び健康関連データの責任ある共有に関する枠組み
Marco de actuación para el uso compartido responsable de datos genómicos y relativos a la salud
Framework para Compartilhamento Responsável de Dados Genômicos e Relacionados à Saúde
Rahmenkonzept für die verantwortungsvolle Datenweitergabe genomischer und
gesundheitsbezogener Daten
Framework per la condivisione responsabile di dati genomici e relativi alla salute
Концепция ответственного обмена геномными данными и данными,
связанными со здоровьем человека
genomicsandhealth.org
GA4GH Regulatory and Ethics Working Group
• Consent Policy
• Consent Clauses
and Template for
International
Data Sharing
7
• Privacy &
Security Policy
• Data Sharing
Lexicon
• Accountability
Policy
Framework for Responsible Sharing of
Genomic and Health-Related Data
genomicsandhealth.org
• Undertaken by the members
• Catalyzed and supported by GA4GH coordinators and Working
Groups
• Purpose: to drive learning, identify requirements, evaluate value
and coordinate activity
Beacon Project
Matchmaker Exchange
BRCA Challenge
Demonstration projects
genomicsandhealth.org
3 Tiers of the BRCA Exchange
9
genomicsandhealth.org
Variant Databases: Ethics?
10
genomicsandhealth.org
Variant Databases: Ethics?
11
genomicsandhealth.org
Negligent Laboratory and Database Curation?
12
(2007) (2008)
genomicsandhealth.org
Negligent Laboratory and Database Curation? (cont’d)
13
Alleged that Athena:
• Failed to provide an accurate genetic result
• Failed to update its variant classifications
Standard of Care for Variant Classification?
• Athena did not follow its own scheme for classification.
• Athena had specific knowledge variant was pathogenic
• 2 (Athena) publications linked the mutation to the disease
• Athena patent applications included the variant
genomicsandhealth.org
Negligent Communication?
14
Update:
genomicsandhealth.org
Variant Databases: Shared Responsibility?
15
genomicsandhealth.org
genomicsandhealth.org
GA4GH Framework
“It interprets the right of all people to share in the benefits of scientific
progress and its applications as being the duty of data producers and users
to engage in responsible scientific inquiry and to access and share genomic
and health-related data across the translation continuum, from basic
research through practical applications. It recognizes the rights of data
producers and users to be recognized for their contributions to research,
balanced by the rights of those who donate their data. In addition to being
founded on the right of all citizens in all countries to the benefits of the
advancements of science, and on the right of attribution of scientists, it also
reinforces the right of scientific freedom.”
Global Alliance for Genomics and Health, “Framework for Responsible Sharing
of Genomic and Health-Related Data”
genomicsandhealth.org

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Use of open, curated variant databases: ethics? Liability? - Bartha Knoppers

  • 1. genomicsandhealth.org Bartha M. Knoppers Director of the Centre of Genomics and Policy, McGill Chair, GA4GH Regulatory and Ethics Working Group Canada Research Chair in Law and Medicine Adrian Thorogood Academic Associate, Centre of Genomics and Policy. McGill Coordinator, GA4GH Regulatory and Ethics Working Group Use of open, curated variant databases: Ethics? Liability?
  • 3. genomicsandhealth.org Mission To accelerate progress in human health by helping to establish a common framework of harmonized approaches to enable effective and responsible sharing of genomic and clinical data, and by catalyzing data sharing projects that drive and demonstrate the value of data sharing
  • 4. genomicsandhealth.org GA4GH Framework for Responsible Sharing of Genomic and Health-Related Data 4 • Current frameworks are founded on the principle of protection from harm. In contrast, • GA4GH Framework aims to activate the right to science and the right to recognition for scientific production by promoting responsible data sharing. http://genomicsandhealth.org/framework
  • 5. genomicsandhealth.org Human Rights Foundation Universal Declaration of Human Rights, (1948) 5 “The Right to Science” “Everyone has the right to the protection of the moral and material interests resulting from any scientific, literary or artistic production of which he is the author.” “Everyone has the right freely to participate in the cultural life of the community, to enjoy the arts and to share in scientific advancement and its benefits.” 27(1) 27(2) “The Right to Recognition”
  • 6. genomicsandhealth.org Framework for Responsible Sharing of Genomic and Health-Related Data 6 The Framework is currently available in 12 languages. Thank you to all the volunteers! • Arabic • Chinese • French • German • Greek • Hindi • Italian • Japanese • Portuguese • Spanish • Russian Πλαίσιο για την Υπεύθυνη Κοινοχρησία Γονιδιωματικών και άλλων Ιατρικών Δεδομένων 基因组学与健康相关数据负责任的共享框架 ‫بالصحة‬ ‫والمتصلة‬ ‫الجینومیة‬ ‫للمعلومات‬ ‫مسؤول‬ ‫لتبادل‬ ‫إطار‬ Cadre pour un partage responsable des données génomiques et des données de santé ゲノム及び健康関連データの責任ある共有に関する枠組み Marco de actuación para el uso compartido responsable de datos genómicos y relativos a la salud Framework para Compartilhamento Responsável de Dados Genômicos e Relacionados à Saúde Rahmenkonzept für die verantwortungsvolle Datenweitergabe genomischer und gesundheitsbezogener Daten Framework per la condivisione responsabile di dati genomici e relativi alla salute Концепция ответственного обмена геномными данными и данными, связанными со здоровьем человека
  • 7. genomicsandhealth.org GA4GH Regulatory and Ethics Working Group • Consent Policy • Consent Clauses and Template for International Data Sharing 7 • Privacy & Security Policy • Data Sharing Lexicon • Accountability Policy Framework for Responsible Sharing of Genomic and Health-Related Data
  • 8. genomicsandhealth.org • Undertaken by the members • Catalyzed and supported by GA4GH coordinators and Working Groups • Purpose: to drive learning, identify requirements, evaluate value and coordinate activity Beacon Project Matchmaker Exchange BRCA Challenge Demonstration projects
  • 9. genomicsandhealth.org 3 Tiers of the BRCA Exchange 9
  • 12. genomicsandhealth.org Negligent Laboratory and Database Curation? 12 (2007) (2008)
  • 13. genomicsandhealth.org Negligent Laboratory and Database Curation? (cont’d) 13 Alleged that Athena: • Failed to provide an accurate genetic result • Failed to update its variant classifications Standard of Care for Variant Classification? • Athena did not follow its own scheme for classification. • Athena had specific knowledge variant was pathogenic • 2 (Athena) publications linked the mutation to the disease • Athena patent applications included the variant
  • 17. genomicsandhealth.org GA4GH Framework “It interprets the right of all people to share in the benefits of scientific progress and its applications as being the duty of data producers and users to engage in responsible scientific inquiry and to access and share genomic and health-related data across the translation continuum, from basic research through practical applications. It recognizes the rights of data producers and users to be recognized for their contributions to research, balanced by the rights of those who donate their data. In addition to being founded on the right of all citizens in all countries to the benefits of the advancements of science, and on the right of attribution of scientists, it also reinforces the right of scientific freedom.” Global Alliance for Genomics and Health, “Framework for Responsible Sharing of Genomic and Health-Related Data”

Notes de l'éditeur

  1. Why Human Rights? Universalizing force Political and legal dimensions that reach beyond the moral appeals of bioethics International legal force Belong to groups as well as individuals (reciprocity) Impose positive duties on governments and private actors
  2. The Beacon Project is an open web service that tests the willingness of international sites to share genetic data. It is being implemented on the websites of the world's top genomic research organizations.  Matchmaker Exchange is a federated network of databases whose goal is to find genetic causes of rare diseases by matching similar phenotypic and genotypic profiles.  The BRCA Challenge aims to advance understanding of the genetic basis of breast cancer and other cancers by pooling data on BRCA genetic variants from around the world, bringing together information on sequence variation, phenotype and scientific evidence. Improved understanding of genetic variation in these genes has the potential to improve patient diagnoses and prevention of disease.
  3. Previous discussion of ethical issues has focused on privacy concerns of sharing combined variant and phenotypic data, particularly for rare mutations. (Knoppers & Laberge, 2000; Cotton, Sallée & Knoppers, 2005; Povey et al, 2010) The Human Variome Project has also provided some guidance on standard disclaimers of liability for variant databases (HVP, 2014).
  4. Previous discussion of ethical issues has focused on privacy concerns of sharing combined variant and phenotypic data, particularly for rare mutations. (Knoppers & Laberge, 2000; Cotton, Sallée & Knoppers, 2005; Povey et al, 2010) The Human Variome Project has also provided some guidance on standard disclaimers of liability for variant databases (HVP, 2014).
  5. Submission Agreements • Could impose quality and ethical standards of submitters • But, database can’t be accountable for labs meeting these standards • Strict agreements discourage voluntary submission Data Use Agreements / Disclaimers Limited effectiveness vis-a-vis physician users (but what about patients?) • Limited (international) effectiveness to disclaim liability for bodily harm