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Submergence Tolerant Rice
Abdelbagi M. Ismail
International Rice Research Institute
Philippines
Flooding effects on rice
Rice is the stable food for over half of
humanity, 2/3 of the world’s poor
Floods annually reduce productivity in over 22
million ha of rice in Asia and large area in
Africa
Incidences set farmers deeper into debt and
poverty
Floods are worsening with climate change
Scientific discoveries provided opportunities
to develop varieties that cope with floods
Transient complete submergence
during vegetative stage (1-2 wks)
Short-term
complete flooding
(attempted escape)

Air

Lowland rice

Short-term
complete flooding
(quiescence)

Air

+SUB1A
SUB1 confers tolerance of complete
submergence in rice
•
•
•
•

1970s: tolerant types identified
1990: Breeding lines, mapping
2006: SUB1 cloned, MABC
SUB1: Major QTL on
Chr. 9, provides
2009 – varieties released

protection for 3 -18 d of
complete flooding

FR13A
“Donor”

Sensitive Variety

-Sub1

+Sub1

Swarna
Sub1 varieties after 17 days of
submergence in the field at IRRI
IR64-Sub1
Samba-Sub1
Samba

IR49830 (Sub1)
Samba

IR64
IR42

IR42

IR64

IR49830 (Sub1)
IR49830 (Sub1)

IR64-Sub1

IR64

Samba

Samba-Sub1

IR64-Sub1

IR42

IR49830 (Sub1)

IR42
IR64-Sub1

Samba

IR49830 (Sub1)

Samba-Sub1
IR64

Genes for submergence tolerance moved into
popular “mega-varieties”
July poor farmers to cope
Sub1 varieties: help31
with perennial flooding

Mr. Asha Ram Pal
Village Palia Goa,
District Faizabad,
Uttar Pradesh

Released in Bangladesh,
India and Philippines 2009…
Nepal in February 2011
Major support from BMZ, Japan
USAID; B&MGF, IFAD enables us
to reach > 3,000,000 farmers in
2012; millions over next few ears

Oct. 31
Pooja

Swarna-Sub1 (DS)

Pooja

Pooja

Older seedlings
for
Retransplanting

Puri distt., Orissa; Sept 29, 2011
Fast adoption by farmers

2013: Sub1 Varieties reached ~ 4 m farmers on ~1.7 m ha
Ismail et al., 2013, FCR
SUB1 in farmers’ fields
Enhances survival and recovery and shorten delay in
maturity caused by submergence
Provide yield advantage of 1 to 3.5 t ha-1 in farmers’
fields following submergence
No effects on yield or quality in absence of stress
Works in all genetic backgrounds and environments
Effective from seedling to early reproductive stage
Nursery
Swarna-Sub1

Vegetative
Swarna-Sub1
Swarna

Reproductive
Swarna-Sub1

Swarna

Swarna
Several Sub1 varieties released in Asia
Breeding line
IR05F102 (Swarna)

Year

designation

Country

2009

Improved Suwarna

India

2009

INPARA-5

Indonesia

2010

BRRI dhan-51

Bangladesh

2011

Swarna-Sub1

Nepal

2011

Yemyoke Khan

Myanmar

2009

NSIC Rc194

Philippines

2009

INPARA-4

Indonesia

IR07F290 (BR11)

2010

BRRI dhan-52

Bangladesh

IR09F436 (Ciherang)

2011

INPARA-5

Indonesia

2013

BINA dhan11

Bangladesh

2012

S. Mahsuri-Sub1

India

2011

S. Mahsuri-Sub1

Nepal

2013

BINA dhan12

Bangladesh

IR49830-7-1-2-1-3

1999

Popoul

Cambodia

IRRI 119

1997

PSB Rc 68

Philippines

IR07F102 (IR64)

IR07F101 (S. Mahsuri)
Opportunities for greater impact
More resilient varieties with tolerance of
multiple stresses – drought, salinity, pests
and diseases
Shorter maturing varieties with Sub1
provided opportunities for multiple crops in
one year
Tolerant varieties provide assurance for
farmers to invest in inputs and good
management, hence higher yields
Having sufficient food and stable income help
farmers to move out of poverty
Elements of success of SUB1 deployment
Submergence tolerant versions of popular varieties
“Marketable product”
Effective networks of partners => over 450 partners
in South Asia
Strong awareness program to generate interest of
seed producers and demand from farmers
Strong policy support to:
‒ Stimulate investments in seed systems &
infrastructures
‒ Enabling environments through changes in varietal
release guidelines and seed policies
Additional investments through parallel programs
from national and international sources
Thank you
USA:
Pam Ronald (UCD)
Julia-Bailey-Serres
(UCR)

(BMZ)

IRRI
Dave Mackill
E. Septiningsih
Vangie Ella
Bert Collard
Umesh Singh
Sigrid Heuer
Sudhanshu Singh
Gina Vergara
Manzoor Dar
M. A. Bari
Yoichi Kato

R&D Partners
NARES
NGOs
Private Co.
Farmers &
organizations

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Submergence tolerant rice

  • 1. Submergence Tolerant Rice Abdelbagi M. Ismail International Rice Research Institute Philippines
  • 2. Flooding effects on rice Rice is the stable food for over half of humanity, 2/3 of the world’s poor Floods annually reduce productivity in over 22 million ha of rice in Asia and large area in Africa Incidences set farmers deeper into debt and poverty Floods are worsening with climate change Scientific discoveries provided opportunities to develop varieties that cope with floods
  • 3. Transient complete submergence during vegetative stage (1-2 wks) Short-term complete flooding (attempted escape) Air Lowland rice Short-term complete flooding (quiescence) Air +SUB1A
  • 4. SUB1 confers tolerance of complete submergence in rice • • • • 1970s: tolerant types identified 1990: Breeding lines, mapping 2006: SUB1 cloned, MABC SUB1: Major QTL on Chr. 9, provides 2009 – varieties released protection for 3 -18 d of complete flooding FR13A “Donor” Sensitive Variety -Sub1 +Sub1 Swarna
  • 5. Sub1 varieties after 17 days of submergence in the field at IRRI IR64-Sub1 Samba-Sub1 Samba IR49830 (Sub1) Samba IR64 IR42 IR42 IR64 IR49830 (Sub1) IR49830 (Sub1) IR64-Sub1 IR64 Samba Samba-Sub1 IR64-Sub1 IR42 IR49830 (Sub1) IR42 IR64-Sub1 Samba IR49830 (Sub1) Samba-Sub1 IR64 Genes for submergence tolerance moved into popular “mega-varieties”
  • 6. July poor farmers to cope Sub1 varieties: help31 with perennial flooding Mr. Asha Ram Pal Village Palia Goa, District Faizabad, Uttar Pradesh Released in Bangladesh, India and Philippines 2009… Nepal in February 2011 Major support from BMZ, Japan USAID; B&MGF, IFAD enables us to reach > 3,000,000 farmers in 2012; millions over next few ears Oct. 31
  • 8. Fast adoption by farmers 2013: Sub1 Varieties reached ~ 4 m farmers on ~1.7 m ha Ismail et al., 2013, FCR
  • 9. SUB1 in farmers’ fields Enhances survival and recovery and shorten delay in maturity caused by submergence Provide yield advantage of 1 to 3.5 t ha-1 in farmers’ fields following submergence No effects on yield or quality in absence of stress Works in all genetic backgrounds and environments Effective from seedling to early reproductive stage Nursery Swarna-Sub1 Vegetative Swarna-Sub1 Swarna Reproductive Swarna-Sub1 Swarna Swarna
  • 10. Several Sub1 varieties released in Asia Breeding line IR05F102 (Swarna) Year designation Country 2009 Improved Suwarna India 2009 INPARA-5 Indonesia 2010 BRRI dhan-51 Bangladesh 2011 Swarna-Sub1 Nepal 2011 Yemyoke Khan Myanmar 2009 NSIC Rc194 Philippines 2009 INPARA-4 Indonesia IR07F290 (BR11) 2010 BRRI dhan-52 Bangladesh IR09F436 (Ciherang) 2011 INPARA-5 Indonesia 2013 BINA dhan11 Bangladesh 2012 S. Mahsuri-Sub1 India 2011 S. Mahsuri-Sub1 Nepal 2013 BINA dhan12 Bangladesh IR49830-7-1-2-1-3 1999 Popoul Cambodia IRRI 119 1997 PSB Rc 68 Philippines IR07F102 (IR64) IR07F101 (S. Mahsuri)
  • 11. Opportunities for greater impact More resilient varieties with tolerance of multiple stresses – drought, salinity, pests and diseases Shorter maturing varieties with Sub1 provided opportunities for multiple crops in one year Tolerant varieties provide assurance for farmers to invest in inputs and good management, hence higher yields Having sufficient food and stable income help farmers to move out of poverty
  • 12. Elements of success of SUB1 deployment Submergence tolerant versions of popular varieties “Marketable product” Effective networks of partners => over 450 partners in South Asia Strong awareness program to generate interest of seed producers and demand from farmers Strong policy support to: ‒ Stimulate investments in seed systems & infrastructures ‒ Enabling environments through changes in varietal release guidelines and seed policies Additional investments through parallel programs from national and international sources
  • 13. Thank you USA: Pam Ronald (UCD) Julia-Bailey-Serres (UCR) (BMZ) IRRI Dave Mackill E. Septiningsih Vangie Ella Bert Collard Umesh Singh Sigrid Heuer Sudhanshu Singh Gina Vergara Manzoor Dar M. A. Bari Yoichi Kato R&D Partners NARES NGOs Private Co. Farmers & organizations