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Onyx:
A Flexible and Extensible
Data Processing System
전병곤, 김주연, 송원욱
Software Platform Lab
Joint work with 양영석, 이산하, 서장호, 어정윤, 이계원, 엄태건, 이우연,
이윤성, 정주성, 하현민, 정은지, 김수정, 유경인, 신동진
1
Data Processing from 10,000 Feet
2
Data Processing Application
Data Processing Framework
Resource Environment
Spark, Flink,
Hadoop MR,
Dryad, Tez,
...
Data Processing from 10,000 Feet
3
Data Processing Application
Data Processing Framework
Resource Environment
Spark, Flink,
Hadoop MR,
Dryad, Tez,
...
Existing frameworks perform poorly in new resource
environments (e.g., disaggregation, transient resources)
Disaggregation
4
Compute Storage
(Ref. OpenCompute)
Intermediate data generated from compute nodes
should be written to and read from storage nodes.
Transient Resources
5
Preemption!
Task preemption can cause expensive recomputation.
Cross Datacenter
6
Wide-area network bandwidth is scarce and expensive
Data Processing from 10,000 Feet
7
Data Processing Application
Data Processing Framework
Resource Environment
Spark, Flink,
Hadoop MR,
Dryad, Tez,
...
It is hard to add new application optimization features
to existing frameworks.
Dynamic Optimization
Dynamic skew handling
Optimizing job execution based on its characteristics
Adapting execution to resource elasticity
8
Onyx
Key observation: current data processing frameworks
are not flexible and extensible.
9
=> Onyx: A new flexible and extensible data processing
system
Onyx Architecture
Dataflow Program
Onyx Compiler
Onyx Runtime
Cluster
10
Onyx Compiler
11
Beam Program
Execution Plan
OnyxCompiler
Beam Frontend
Onyx Backend
Spark Frontend
Spark Program
IR
DAG
IR (Intermediate Representation) DAG
: Program-agnostic DAG with Annotations
12
Vertex Edge
Vertex Labels
Type: Operator/Loop
Placement: GPUNode/
ReservedNode/TransientNode/Any
Parallelism
Edge Labels
Type: 1:1/Broadcast/Shuffle
Mode: Push/Pull
Storage: Memory/Disk/RemoteDisk
MapReduce IR DAG Example
13
Shuffle,Pull,Disk
Classical MapReduce
Small-scale MapReduce
Shuffle,Push,Memory
Map
Map Reduce
Reduce
Compiler Passes
Transform an IR DAG into an optimized IR DAG after a series of “passes”
Compile-time annotation pass examples
● Parallelism pass
● Executor placement pass
● Data flow model pass
● Stage partitioning pass
14
Compiler Passes
Transform an IR DAG into an optimized IR DAG after a series of “passes”
Compile-time reshaping pass examples
● Loop extraction pass
● Loop fusion pass (loop optimization)
● Common subexpression elimination pass
● Data skew reshaping pass
Runtime pass example
● Data skew runtime pass
15
Compiler to Runtime
1616
Type: “Map” Operator
Placement: “Reserved” Node
Parallelism: 100
Shuffle,Pull,Disk
Type: “Reduce” Operator
Placement: “Reserved” Node
Parallelism: 50
Reduce Stage
Index
Map Stage
Index
Optimized IR DAG
Compiler to Runtime
1717
Stage Stage
“Map”Tasks “Reduce”Tasks.
.
.
.
.
.
.
X 100
.
.
X 50
I/O channels for
intermediate data flow
between tasks
Execution Plan
Distributed Execution in Onyx Runtime
Stage
18
Executor Executor Executor Executor
Master
Distributed Execution in Onyx Runtime
Master Stage
19
Executor Executor Executor Executor
TaskGroup(Tasks)
Distributed Execution in Onyx Runtime
Master Stage
20
Executor Executor Executor Executor
Onyx In Action
21
Onyx in Action
● Onyx implementation
● Onyx compiler and runtime components
● Onyx job execution
● Onyx dynamic optimization
22
Onyx Implementation
● Programming Models:
○ Apache Beam applications supported
○ Spark applications coming up shortly
● Implemented on Apache REEF
○ which uses YARN or Mesos for resource management
● Implemented using Java 8
○ makes good use of lambda and stream 23
Key Components (Compiler)
24
Key Components (Runtime)
25
Key Components (Runtime)
26
Job Execution Demo
Will show how:
1. Job execution can be controlled flexibly and
2. Job execution properties can be extended using:
a. Annotation Pass
b. Policy
3. An iterative part of a job can be represented using:
a. LoopExtraction Pass (a Reshaping Pass)
4. Status of a running job can be monitored using:
a. a Web UI 27
MapReduce
ALS
MapReduce
We will show two executions of MapReduce using different
settings:
● Intermediate data is saved in disk, and pulled by the reducers
● Intermediate data is saved in memory, and pushed to the reducers
28
Demo
Map Data in Disk, Pulled
29
Shuffle,Pull,Disk
Reduce
Stage
Map
Stage
Demo
Map Data in Memory, Pushed
30
Shuffle,Push,Memory
Reduce
Stage
Map
Stage
31
32
33
Alternating Least Squares Example
● Alternating Least Square is an ML algorithm used
commonly in recommendation systems.
● Most ML algorithms are iterative processes
=> ALS is one of them!
34
Alternating Least Squares Example
Naively…
35
(Read input data) . . . . . . . . . . . . (Write output). . . . . . .
Iteration 1 Iteration 2 Iteration N
But what if we want to decide this
“N” according to some condition?
(ex. model convergence in ML)
A set of operators that executes the ALS algorithm
Alternating Least Squares Example
Something special we have for the ALS example: Loops!
36
(Read input data) . . . . . . . . . . . . (Write output)
LoopVertex
with termination condition
(Read input data) . . . . . . . . . (Write output). . . . . .
Iteration 1 Iteration NIteration 2
Demo
ALS
37
38
39
40
Dynamic Optimization
Will show how Onyx achieves dynamic optimization using:
1. Reshaping Pass
=> for metric collection
2. Runtime Pass
=> for generating a dynamically optimized plan
41
Dynamic Data Partitioning Example
● What happens if there is a data skew while executing a job?
● How do we detect such a data skew and partition data appropriately?
42
Onyx Compiler
Onyx Runtime
AnnotationPass(es)
IR DAG
Dynamic Data Partitioning Example
● What happens if there is a data skew while executing a job?
● How do we detect such a data skew and partition data appropriately?
43
Onyx Compiler
Onyx Runtime
ReshapingPass
IR DAG
44
45
46
Dynamic Data Partitioning Example
● What happens if there is a data skew while executing a job?
● How do we detect such a data skew and partition data appropriately?
47
Onyx Compiler
Onyx Runtime
StageStage
Optimized IR DAGExecution Plan Conversion
● What happens if there is a data skew while executing a job?
● How do we detect such a data skew and partition data appropriately?
Dynamic Data Partitioning Example
48
Onyx Compiler
Onyx Runtime
Stage
Stage
Execution Plan
Execution Plan Conversion
Dynamic Data Partitioning Example
49
Onyx Compiler
Onyx Runtime
Execute!
● What happens if there is a data skew while executing a job?
● How do we detect such a data skew and partition data appropriately?
Stage
Stage
Execution Plan
Dynamic Data Partitioning Example
50
Onyx Compiler
Onyx Runtime
Data Size Metric
Job Executing...
● What happens if there is a data skew while executing a job?
● How do we detect such a data skew and partition data appropriately?
Dynamic Data Partitioning Example
51
Onyx Compiler
Onyx Runtime
New IR DAG
RuntimePass(es)
● What happens if there is a data skew while executing a job?
● How do we detect such a data skew and partition data appropriately?
Dynamic Data Partitioning Example
52
Onyx Compiler
Onyx Runtime
Execute!
New Execution Plan
● What happens if there is a data skew while executing a job?
● How do we detect such a data skew and partition data appropriately?
Stage
Stage
Lessons Learned
1. Dynamic Optimization: extensible to any job
a. A Reshaping Pass to define when customizable metric should be
received from Runtime
b. A Runtime Pass to define how to change the DAG using the received
metric
53
Lessons Learned
2. Extend the various options for execution properties by
a. Implementing new Compile-Time Passes (Annotation + Reshaping)
b. Adding new implementations of the interfaces of the configurable
components for Runtime
54
Lessons Learned
3. Flexibly control the execution properties by:
a. Pre-defined/newly implemented Compile-Time Passes
b. Using Composite Passes
c. Using Policies
55
Harnessing Transient Resources with Onyx
56
Harnessing Transient Resources with Onyx
57
Pado (EuroSys 2017): A Special Data Processing Engine for
Harnessing Transient Resources
as a simple policy on
Onyx, a flexible and extensible data processing system.
Batch Engine
58
MapReduce
Flume
Spark
...
Transient Resources
?
59
Transient Resources
Resources borrowed from
over-provisioned latency-critical jobs
(search service, online mall, etc.)
Data Analytics with Transient Resources
60
....
Dataflow
Program
Transient
Data Analytics with Transient Resources
61
....
Dataflow
Program
Execute! Transient
Tasks Tasks Tasks Tasks
Tasks Tasks Tasks Tasks
Tasks Tasks Tasks Tasks
Data Analytics with Transient Resources
62
....
Dataflow
Program
Execute! Transient
Tasks Tasks Tasks Tasks
Tasks Tasks Tasks Tasks
Tasks Tasks Tasks Tasks
Data Analytics with Transient Resources
63
....
Dataflow
Program
Execute! Transient
Data
Data
Data
Solution
64
....
Dataflow
Program Transient
Solution
65
....
Dataflow
Program Transient
Analyze
Solution
66
....
Dataflow
Program
Other
Computations
Valuable
Computations Reserved
Transient
Analyze
Valuable
Our definition of Valuable computations
Not so valuable
One-to-One One-to-Many Many-to-One Many-to-Many
Valuable
Our definition of Valuable computations
Not so valuable
One-to-One One-to-Many Many-to-One Many-to-Many
... ... ... ...
69
No dependency Many-to-Many
Map Reduce
Many-to-Many
Map Reduce
70
No dependency
⇒ Not so valuable
⇒ Transient
Many-to-Many
⇒ Valuable
⇒ Reserved
Map Reduce
Many-to-Many
Map Reduce
Batch Engines (e.g., Spark)
2 Transient, 1 Reserved Containers 71
Our Approach
ReservedTransient
Batch Engines (e.g., Spark)
Map, Reduce tasks on each
container 72
ReservedTransient
Our Approach
Map1 Map2 Map3
Reduce1 Reduce2 Reduce3
Batch Engines (e.g., Spark)
Map tasks on Transient and
Reduce task on Reserved73
Our Approach
Map1 Map2 Map3
Reduce1 Reduce2 Reduce3 Reduce1
ReservedTransient
Map1 Map2
Batch Engines (e.g., Spark)
74
Our Approach
Map1 Map2 Map3 Map1 Map2
Push Map Outputs to Destination
Reserved Containers
ReservedTransient
Maintain Map Outputs
on Local Disks
Batch Engines (e.g., Spark)
75
Our Approach
Reduce1 Reduce2 Reduce3
ReservedTransient
Reduce1
Read Input Data from Local
Reserved Containers
Pull Map Outputs
Batch Engines (e.g., Spark)
76
Our Approach
Reduce1 Reduce2 Reduce3
ReservedTransient
Reduce1
Eviction of Transient Containers
→ Map Outputs Not Destroyed
Eviction of Transient Containers
→ Map Outputs Destroyed
Batch Engines (e.g., Spark)
77
Our Approach
Reduce1 Reduce2 Reduce3
Map1 Map2 Map3
Cascading Recomputation of
5 Tasks
ReservedTransient
Reduce1
No Recomputation
Step 1:
Transient/Reserved
Executor Placement Pass
78
Operator Placement Example with the
Transient Resource Policy
Multinomial Logistic Regression(MLR)
: Machine learning application for classifying
inputs, like tumors as malignant or benign, and
ad clicks as profitable or not.
Gradients are used to update the regression
model, which is used for prediction.
79
Executor Placement Example
Create
1st
Model
Compute
Gradient
Aggr
Gradient
Compute
2nd
Model
Read
Training
Data
....
80
One-to-One
One-to-Many
Many-to-One Costly!
Create
1st
Model
Compute
Gradient
Aggr
Gradient
Compute
2nd
Model
Read
Training
Data
....
Reserved TransientNo
Dependency
No
Dependency
81
Many-to-One Costly!
One-to-One
One-to-Many
Executor Placement Example
Create
1st
Model
Compute
Gradient
Aggr
Gradient
Compute
2nd
Model
Read
Training
Data
....
Reserved Transient
82
Many-to-One Costly!
No Costly Dependency
with Parents
One-to-One
One-to-Many
Executor Placement Example
Compute
Gradient
Aggr
Gradient
Compute
2nd
Model
Read
Training
Data
....
Reserved TransientCostly Dependency
with Parent
83
Many-to-One Costly!
One-to-One
One-to-Many
Costly Dependency
with Parent, Pipelined
Executor Placement Example
Create
1st
Model
Step 2:
Data Flow Model Pass
84
Compute
Gradient
Aggr
Gradient
Compute
2nd
Model
Read
Training
Data
....
Reserved Transient
85
Recall..
Safe! Prone to
evictions :(
Create
1st
Model
Compute
Gradient
Aggr
Gradient
Compute
2nd
Model
Read
Training
Data
....
Reserved Transient
86
Must evacuate data out of transient executors ASAP
Create
1st
Model
Compute
Gradient
Aggr
Gradient
Compute
2nd
Model
Read
Training
Data
....
Reserved Transient
87
Push data out as soon as it is ready!
Create
1st
Model Push
Compute
Gradient
Aggr
Gradient
Compute
2nd
Model
Read
Training
Data
....
Reserved Transient
88
No need to hurry for data in Reserved containers
Pull Pull
Push
Create
1st
Model
Pull
Pull
Step 3:
Stage Partitioning Pass
89
Stage Partitioning in Compiler
90
Execute subgraph-by-subgraph
⇒ Partition into subgraphs
⇒ Good abstraction for handling evictions/faults
Compute
Gradient
Aggr
Gradient
Compute
2nd
Model
Read
Training
Data
....
Reserved Transient
91
Stage Partitioning Example
Create
1st
Model
Pull Pull
Push
Pull
Pull
Compute
Gradient
Aggr
Gradient
Compute
2nd
Model
Read
Training
Data
....
Reserved Transient
92
Stage Partitioning Example
Create
1st
Model
Compute
Gradient
Aggr
Gradient
Compute
2nd
Model
Read
Training
Data
....
Reserved Transient
93
Stage Partitioning Example
Create
1st
Model
Compute
Gradient
Aggr
Gradient
Compute
2nd
Model
Read
Training
Data
....
Reserved Transient
94
Stage Partitioning Example
Create
1st
Model
Demo
Executor Placement Pass
DataFlowModel Pass
Stage Partitioning Pass
with MLR example
95
MLR DAG
96
ExecutorPlacementPass
97
1-to-1
1-to-1
1-to-many
Many-to-Many
DataFlowModelPass
Pull
Push
Pull
Not 1-to-1
Not 1-to-1
StagePartitioningPass
Stage-1
Stage-2
Stage-3
Batch Engines
100
Spark 2.0.0
Onyx with
suggested
optimizations
VS
Containers
● Amazon EC2s(with local SSDs) as containers
● 40 Transient Containers, 5 Reserved Containers
● All containers used for computation
101
Workloads
● Alternating Least Squares
Yahoo! Music User Ratings of Songs with Artist, Album, and Genre Meta
Information, v. 1.0. https://webscope. sandbox.yahoo.com/catalog.php?datatype=r
● Multinomial Logistic Regression
Synthetic
● Map-Reduce
Page view statistics for Wikimedia projects.
https://dumps.wikimedia.org/other/pagecounts-raw
102
Job Completion Time (Lower is Better)
103
4.13x
3.52x
5.15x
Summary
● Introduces a new data processing system that is flexible
and extensible
○ Compiler that represents various execution policies
○ Runtime that are modular and reconfigurable
● Adapts data processing seamlessly for new deployment
and application requirements
104
105
We are working on creating an Apache incubator
project. We look forward contribution from many
developers!
We are hiring software developers!
Contact: onyx@spl.snu.ac.kr
Software platform lab site: http://spl.snu.ac.kr
Onyx:
A Flexible and Extensible
Data Processing System
전병곤, 김주연, 송원욱
Software Platform Lab
Joint work with 양영석, 이산하, 서장호, 어정윤, 이계원, 엄태건, 이우연,
이윤성, 정주성, 하현민, 정은지, 김수정, 유경인, 신동진
106

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