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STEREOCHEMISTRY
W h a t is
S t e r e o is o m e r ?
Identical (Same Compounds)   Stereoisomers (Different
                             Compounds)
 Isomers:
Different compounds with same molecular
 formula
 Stereoisomers:
isomers that have same molecular formula and
  connectivity but differ in the way the atoms are
  oriented in space - i.e. the difference between
  two stereoisomers lies only in the three
  dimensional arrangement of atoms.

 Stereochemistry:
chemistry that studies the properties of stereo-
 isomers
   Two types of stereoisomers:
    ◦ enantiomers
      two compounds that are nonsuperimposable
       mirror images of each other

    ◦ diastereomers
      Two stereoisomers that are not mirror
       images of each other

      Geometric isomers (cis-trans isomers) are one
      type of diastereomers.
   The Light whose electric fields oscillate in
    single plane.
   The ability of a compound to rotate the plane
    polarized light either clockwise or anti-
    clockwise. E.g. Tartaric Acid
Substances    should be light sensitivity.
They should have chiral carbon
They should rotate plane polarized light

(PPL) in different ways.
As a result, they should produce two

different configurations i.e. enantiomers
   An optically active compound that rotates
    plane polarized light in a clockwise direction
                e.g. (+)Epinephrine
An optically active compound that rotates
plane polarized light in anti-clockwise
direction. E.g. (-) Epinephrine
A carbon which is bonded with four different
groups.
   Some molecules are chiral:




                  Asymmetric
                (chiral) carbon
   Organic compounds that contain a chiral
    Carbon usually have two non
    superimposable structures. These two
    structures are mirror images of each other.
 Have  identical molecular formula
 Have same physical properties
 Both rotate plane polarized light (PPL) but in

  opposite sense.
 One rotates PPL to clockwise and another to

  anti-clockwise.
   Equimolar mixture of left- and right-handed
    enantiomers of a chiral molecule.
                   Properties
 Optically inactive i.e. zero (0) rotation
 Sometimes have different properties of either

  pure enantiomers
 Different in solubility, melting and boiling

  points.
Example: Ibuprofen
A compound with two identical chirality center
having no optical sensitivity because-
They have two identical chiral parts
One part is optically active and another part

is inactive.
Optically active parts is neutralizes by

inactive parts.
As a result they have no light sensitivity
Racemic mixture                Meso compound

Mixture of two Equimolar       One compound having two
enantiomers                    identical chiral parts.
Individually light sensitive   Though chiral C is present,
but the mixture s neutral       the compound is not light
                               sensitive
Components of the               one compound, so two
mixture can be separated.      chiral parts can’t be
                               separated.
Mixture of d-lactic acid and Tartaric acid
l-lactic acid
   Stereoisomers are different compounds and
    often have different properties.

   Each stereoisomer must have a unique
    name.

   The Cahn-Ingold-Prelog convention is used
    to identify the configuration of each
    asymmetric carbon atom present in a
    stereoisomer.
    ◦ (R) and (S) configuration
   The two enantiomers of alanine are:

          CO2H                     CO2H

          C                        C
               H              H        CH3
    H3C       NH2            H2N

    Natural alanine        Unnatural alanine
     (S)-alanine            (R)-alanine
   Assign a numerical priority to each group
    bonded to the asymmetric carbon:
    ◦ group 1 = highest priority
    ◦ group 4 = lowest priority

   Rules for assigning priorities:
    ◦ Compare the first atom in each group (i.e.
      the atom directly bonded to the asymmetric
      carbon)
       Atoms with higher atomic numbers have
        higher priority
Cl 1                     3
                                          CH3
     3  C 2                           C H4
   H3C
          OCH2CH3                      NH2
      H                           1 F  2
         4

Example priorities:

I > Br > Cl > S > F > O > N > 13C > 12C > 3H > 2H > 1H
   In case of ties, use the next atoms along the
    chain as tiebreakers.

                  2 CH CH Br
                      2  2


                    C     H4
          3 CH3 2
              CH
                        CH(CH3)2
                        1

        CH(CH3)2 > CH2CH2Br > CH3CH2
Y
                     C   Y
                                             C       Y       C
                                             Y       C
           Treat double and triple bonds as if both
                          Y
C
    C
    O       atoms in the Y Y were duplicated or
             Y         C bond
                         C      C
O   C
            triplicated:
            H                Y       C
                                                                         Y
    C                                    C       Y                           Y
         OH
H       C Y              C       Y               C       Y               C   Y   C
        CH2OH                                                                C   Y   C
                         Y       C                                       Y   C
                                                                             Y   C
                 O 2 H                       C    C O
                                                  Y
            C    Y C                              C Y2
                                                  O C H
            Y          1
                  C C OH                                     C     1
                                                                   OH
                4 H CH2OH                        C4 H
                                                    Y            CH2OH
                     3                              C            Y3
                                                 Y C
   Using a 3-D drawing or model, put the 4th priority
    group in back.

   Look at the molecule along the bond between the
    asymmetric carbon and the 4th priority group.

   Draw an arrow from the 1st priority group to the 2nd
    group to the 3rd group.
    ◦ Clockwise arrow              (R) configuration
    ◦ Counterclockwise arrow           (S) configuration
 Theenantiomer with most remote OH from
 the CHO to the right is called D(+)
 enantiomer
 E.g. D(+) glyceraldehyde

 Theenantiomer with most remote OH from the
 CHO to the left is called L(-) enantiomer
 E.g. L(-) glyceraldehyde
   Except for inorganic salts and a few low-
    molecular-weight organic substances, the
    molecules of living systems are chiral
   Although these molecules can exist as a
    number of stereoisomers, generally only one
    is produced and used in a given biological
    system
   amino acids, nucleosides, carbohydrates
    and phospholipids are chiral molecules
 Bindingof drugs with enzymes depend
 on chirality
1.Ibuprofen




     S(+) Ibuprofen   R(-)
  Ibuprofen
2. Thalidomide
3. Naproxen




 S(+) Naproxen   R(-) Naproxen
4. Fluoxetine
5. Epinephrine




S(+) Epinephrine   R(-)
Epinephrine
ROLL- 11 & 13
     Semester: 5 th
       Batch: 8 th
Department o Pharmacy
 Dhaka International
      University

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Sereochemistry ppt by Sattar

  • 2. W h a t is S t e r e o is o m e r ?
  • 3. Identical (Same Compounds) Stereoisomers (Different Compounds)
  • 4.  Isomers: Different compounds with same molecular formula  Stereoisomers: isomers that have same molecular formula and connectivity but differ in the way the atoms are oriented in space - i.e. the difference between two stereoisomers lies only in the three dimensional arrangement of atoms.  Stereochemistry: chemistry that studies the properties of stereo- isomers
  • 5.
  • 6. Two types of stereoisomers: ◦ enantiomers  two compounds that are nonsuperimposable mirror images of each other ◦ diastereomers  Two stereoisomers that are not mirror images of each other  Geometric isomers (cis-trans isomers) are one type of diastereomers.
  • 7.
  • 8.
  • 9. The Light whose electric fields oscillate in single plane.
  • 10.
  • 11.
  • 12. The ability of a compound to rotate the plane polarized light either clockwise or anti- clockwise. E.g. Tartaric Acid
  • 13. Substances should be light sensitivity. They should have chiral carbon They should rotate plane polarized light (PPL) in different ways. As a result, they should produce two different configurations i.e. enantiomers
  • 14. An optically active compound that rotates plane polarized light in a clockwise direction e.g. (+)Epinephrine
  • 15. An optically active compound that rotates plane polarized light in anti-clockwise direction. E.g. (-) Epinephrine
  • 16. A carbon which is bonded with four different groups.
  • 17. Some molecules are chiral: Asymmetric (chiral) carbon
  • 18. Organic compounds that contain a chiral Carbon usually have two non superimposable structures. These two structures are mirror images of each other.
  • 19.  Have identical molecular formula  Have same physical properties  Both rotate plane polarized light (PPL) but in opposite sense.  One rotates PPL to clockwise and another to anti-clockwise.
  • 20. Equimolar mixture of left- and right-handed enantiomers of a chiral molecule. Properties  Optically inactive i.e. zero (0) rotation  Sometimes have different properties of either pure enantiomers  Different in solubility, melting and boiling points. Example: Ibuprofen
  • 21. A compound with two identical chirality center having no optical sensitivity because- They have two identical chiral parts One part is optically active and another part is inactive. Optically active parts is neutralizes by inactive parts. As a result they have no light sensitivity
  • 22.
  • 23. Racemic mixture Meso compound Mixture of two Equimolar One compound having two enantiomers identical chiral parts. Individually light sensitive Though chiral C is present, but the mixture s neutral the compound is not light sensitive Components of the one compound, so two mixture can be separated. chiral parts can’t be separated. Mixture of d-lactic acid and Tartaric acid l-lactic acid
  • 24. Stereoisomers are different compounds and often have different properties.  Each stereoisomer must have a unique name.  The Cahn-Ingold-Prelog convention is used to identify the configuration of each asymmetric carbon atom present in a stereoisomer. ◦ (R) and (S) configuration
  • 25. The two enantiomers of alanine are: CO2H CO2H C C H H CH3 H3C NH2 H2N Natural alanine Unnatural alanine (S)-alanine (R)-alanine
  • 26. Assign a numerical priority to each group bonded to the asymmetric carbon: ◦ group 1 = highest priority ◦ group 4 = lowest priority  Rules for assigning priorities: ◦ Compare the first atom in each group (i.e. the atom directly bonded to the asymmetric carbon)  Atoms with higher atomic numbers have higher priority
  • 27. Cl 1 3 CH3 3 C 2 C H4 H3C OCH2CH3 NH2 H 1 F 2 4 Example priorities: I > Br > Cl > S > F > O > N > 13C > 12C > 3H > 2H > 1H
  • 28. In case of ties, use the next atoms along the chain as tiebreakers. 2 CH CH Br 2 2 C H4 3 CH3 2 CH CH(CH3)2 1 CH(CH3)2 > CH2CH2Br > CH3CH2
  • 29. Y C Y C Y C Y C  Treat double and triple bonds as if both Y C C O atoms in the Y Y were duplicated or Y C bond C C O C triplicated: H Y C Y C C Y Y OH H C Y C Y C Y C Y C CH2OH C Y C Y C Y C Y C O 2 H C C O Y C Y C C Y2 O C H Y 1 C C OH C 1 OH 4 H CH2OH C4 H Y CH2OH 3 C Y3 Y C
  • 30. Using a 3-D drawing or model, put the 4th priority group in back.  Look at the molecule along the bond between the asymmetric carbon and the 4th priority group.  Draw an arrow from the 1st priority group to the 2nd group to the 3rd group. ◦ Clockwise arrow (R) configuration ◦ Counterclockwise arrow (S) configuration
  • 31.
  • 32.  Theenantiomer with most remote OH from the CHO to the right is called D(+) enantiomer E.g. D(+) glyceraldehyde  Theenantiomer with most remote OH from the CHO to the left is called L(-) enantiomer E.g. L(-) glyceraldehyde
  • 33.
  • 34. Except for inorganic salts and a few low- molecular-weight organic substances, the molecules of living systems are chiral  Although these molecules can exist as a number of stereoisomers, generally only one is produced and used in a given biological system  amino acids, nucleosides, carbohydrates and phospholipids are chiral molecules
  • 35.  Bindingof drugs with enzymes depend on chirality
  • 36.
  • 37. 1.Ibuprofen S(+) Ibuprofen R(-) Ibuprofen
  • 39. 3. Naproxen S(+) Naproxen R(-) Naproxen
  • 42.
  • 43. ROLL- 11 & 13 Semester: 5 th Batch: 8 th Department o Pharmacy Dhaka International University

Notes de l'éditeur

  1. Understanding Stereo Isomer