Medicine is undergoing tremendous change. Unlike today, medicine of tomorrow would be pro-active rather than reactive.Medicine would be personalized to individual patient's genome. It would predict, and hence prevent, diseases even before they manifest. Also, this medicine would require active societal participation to bring it from labs to clinics.
3. biology as an information science
Software generates the hardware !!
Only portion of the program is executed in a
particular cell at a given time. How??
Two kinds of information characterize all central
mechanisms of life
Digital information of the genome +
environmental signals
Information handling structures: DNA, RNA
Hierarchical levels of information: genes,
proteins, individual phenotype, gene pools,
biome etc
4. systems approach to disease
The whole is more than the sum of its parts
Whole - ∑ (parts) = emergent properties
Diseases are just network perturbations
Dynamic alteration of expression of
information
Interactome = Genome + Epigenome +
Transcriptome + Proteome + Metabolome + ….
7. family genome sequencing
In the next 10 years or so, individual genome
sequencing would be routine clinical practice
70% sequencing errors could be identified by using
plausability checks based on Mendelian genetics
Rare variants would be identified immediately
Accelerate search for disease-causing genes
Actionable gene variants would allow specification
of how a patient can improve his health
Get SNP’ed: know your pre-disposition to diseases
8.
9. proteomics
20,000 human genes code for millions of
proteins
Comparing proteome across space and time
would enable new markers for diagnostics and
drug design
Targeted proteomics: democratization of human
proteins
Powerful tools in analyzing disease
mechanisms, approaches to identification of
biomarkers
10. metabolomics
Using stable isotopes to follow the fate and rate of
individual metabolites, the measurement of
metabolite fluxes
More information on disease progression and
potential adaptive, compensatory physiological and
patho-physiological mechanisms
MS-based methods to be complemented by pattern-
recognition array-sensors to capture volatile
metabolites in exhaled breath, providing disease-
specific molecular signatures
E-noses: Non-invasive diagnostic devices
11. single cell analysis
Microfluidic technologies to study individual
cells at the genomic and the proteomic levels
Number of discrete cell populations in a
particular tissue or organ
Identification of cell surface molecules to
categorize discrete populations
Characterization of disease states by cell
surface molecules
12. imaging
Spatial and temporal information is critical for
developing reliable disease models
Would allow identification of actionable
network components
Need to develop advance high-resolution, high-
content imaging
Would enable reliable interpretation of
molecular processes in health and disease
Integrated into molecular diagnostics, medical
decision support systems
13. induced pluripotent stem cells
First derived by Takahashi and Yamanaka (2006)
Is a technique for cellular reprogramming
Will be useful in exploring mechanisms of
disease initiation and progression
Would reveal many secrets of development
Will be crucial for curing antigen-specific
autoimmunity and allergies
Accelerator for regenerative medicine
Minimal immune response
14. the promise of p4 medicine
Will quantify wellness and demystify disease
Each individual will be associated with a virtual
data cloud of billions of data points
Data cloud will be reduced to simple
hypotheses on health and disease for each
individual
Quantized self will provide real-time, readily-
digestible insights into optimizing wellness
Stratification of diseases will revolutionize drug
discovery
15. predictive medicine
Blood as a window into disease
Molecular fingerprints of diseases
Assessment of susceptibility to diseases based
on the genetic makeup (SNPs, ethnicity etc)
HLA complex is associated with susceptibility
to >50 diseases
Relative risk = % affected among those with allele
% affected in the general population
DR2 130X prone to nacrolepsy
16. preventive medicine
Designing therapeutic, preventive drugs via
systems approaches
Systems approaches to create vaccines will
transform prevention against infectious
diseases
Reengineering of disease perturbed networks
at the earliest
Shift from focus on disease to focus on
wellness
17. personalized medicine
Different drugs for different genetic subsets of
the population
Each person would be his/her own control
Real-time monitoring of single cells to suggest
changes in the therapy being provided
Need to safeguard against misuse by employers
or insurance companies
18. participatory medicine
Patient-driven social networks
Cloud computing and crowd sourcing of medical
data
Radical changes in medical school curricullum
Big changes in the Big Pharma
Emergence of new companies for development
and transfer of technologies involved
Democratization of medicine
Adequate healthcare affordable to all
19. systems approach to the prion disease
To identify DEGs, diseased brain transcriptomes
were subtracted from control transcriptomes at
10 time points across disease progression.
7400 RNA transcripts, encoded by 1/3rd of mice
genes were altered
4 major networks, involving 300 DEGs, appeared
to participate in prion disease and the networks
were altered sequentially
Dynamics of transcriptome alterations explained
pathophysiology of disease
20. >100 brain-specific mouse transcripts could
be identified, many of them encoding
proteins secreted into blood
A brain-specific blood fingerprint that could
distinguish for the brain –health from
disease, and in case of disease, the type of
disease– can be developed
“ ….In next 10-15 years, we will have a hand-
held device which would measure around 50
proteins of each of the about 50 major organs
from just nanolitres of blood…. ”
21. reference
Hood, L., Balling, R., Auffray, C., Revolutionizing medicine
in the 21st century through systems approaches,
Biotechnol. J. 2012, 7, 992-1001
TED and other talks by Dr Leroy Hood