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Organoids as an in vitro model for enteric disease
Talita Resende
PhD candidate
Advisors: Dr. Connie Gebhart & Dr. Fabio Vannucci
Collaborator: Dr. Milena Saqui-Salces
Allen D. Leman Swine Conference
2018
Enteric diseases – infectious agents
Image adapted from: Holman, Devin B., et al MSystems 2.3 (2017): e00004-17.
Enteric diseases – infectious agents
Image adapted from: Holman, Devin B., et al MSystems 2.3 (2017): e00004-17.
PEDV
TGEV
PDCoV
E. coli, enterotoxigenic
Rotaviruses
Brachyspira hyodysenteriae,
B. hampsonii, B. pilosicoli
Salmonella
Typhimurium, Cholerasuis
Lawsonia intracellularis Coccidiosis
Trichuris
Ascaris suis
Enteric diseases – infectious agents
Images: Holman, Devin B., et al MSystems 2.3 (2017): e00004-17
Van den Bossche, L. (2017) (Doctoral dissertation, Ghent University)..
Host–pathogen interactions
Intestine
Dutta and Clevers, 2017
• Animal models
Instrumental to host–microbe interactions
• Well established
• Uncontrollable microbial diversity
Inter-species variances
Expensive
Ethical concerns
yourgenome.org
gdforum.freeforums.net
zdmsociety.org
https://www.diabeticool.com/
Host–pathogen interactions
Intestine
Dutta and Clevers, 2017
Pampaloni et al, 2007
• Single cell type cultures
Closer to the ‘real situation’
• Well established
• Relatively cheap
• Lack the relationship between different cell types
gdforum.freeforums.net
zdmsociety.org
Gebhart’s lab
• Organoids
•Organotypic tridimensional (3D) structures
•Matrix/scaffold based 3D in vitro culture systems
–Supports the 3D growth
•Originated from
–Embryonic stem cells
–Induced pluripotent cells
–Primary tissues
https://www.rndsystems.com
cience.sciencemag.org
Brain
Intestine
Liver
Lung
Host–pathogen interactions
Dutta and Clevers, 2017
Pampaloni et al, 2007
• 3D in vitro/ex vivo models = Organoids
• Present all organ-specific cell types on their surface
Function as the tissue of origin
• Self-renewed and self-organized
• Reduce use of animals (1 animal = numerous organoids)
Requires expertise to be established routinely
Host–pathogen interactions
Dutta and Clevers, 2017
Pampaloni et al, 2007
•Small intestine – enteroids
•Colon - colonoids
•Crypts and villi (small intestine) morphologically
similar to the intestinal conformation
•In vitro model with tissue-like morpho-physiology
Intestinal organoids
Saqui-Salces’ and Gebhart’s labs
Fatehullah et al, 2016
Dutta and Clevers, 2017
https://www.rndsystems.com
Intestinal organoids
• Some examples of applicability
• Portal of entry
• Shigella and M cells
• Cellular modulation
• Cryptosporidium parvum, Salmonella
• Cytokine release and protein production
• Clostridium difficile
• Viral replication
• Human Norovirus, Rotavirus
• Non-infectious diseases: colorectal carcinoma
Intestinal organoids - Host-pathogen interactions
• Cryptosporidium parvum (Zhang et al, 2016)
• Inhibitory effect on the ex vivo propagation of enteroids from mice
• Decreased expression level of intestinal stem cell markers Stem cells
Intestinal organoids - Host-pathogen interactions
• Salmonella enterica Serovar Typhimurium
• Cytokine release
• Impact in production of α-defensin-5 (Crp5)
Wilson et al, 2015
Forbester et al, 2015
Intestinal organoids - Host-pathogen interactions
• Rotavirus
• Susceptibility to infection  treatment efficacy tests
Yin et al, 2017Yin et al, 2015
Mab “Antivirulence therapy”
Intestinal organoids - Host-pathogen interactions
Our project
Our project
albeitar.portalveterinaria.co
m/
Vannucci &
Gebhart
• Proliferative enteropathy
• Caused by Lawsonia intracellularis
• Cellular proliferation – crypts
• Unknown mechanism
• Cell monocultures
• Used over the years as in vitro models
• Do not replicate cellular proliferation
(Resende et al, 2018 – submitted for publication)
Supernatant (SN)
Our project
Media
• Immunolabelling
• RT-qPCR
• Enteroid size (Area)
L. intracellularis
*Mouse enteroids
Apical side
Lumen
Basal
DAPI
L. intracellularis
Nuclei
L. intracellularis
Our project
Proliferation marker
TAC marker Goblet cells marker
• Mouse enteroids are permissive to infection
• Changes at 3dpi: area, Ki-67 expression, Muc2 expression
• Check cellular proliferation, modulation of epithelial cells, apoptosis rate
• Then what?
• Initiate further research of the mechanisms of proliferation
• New strategies for controlling the disease (antivirulence treatment, antibiotic alternatives)
Our project
• Pig enteroids characterized (Gonzalez et al, 2013)
• Nutrition investigation (Koltes and Gabler, 2015)
• No host-pathogen interaction study to date
• Where are we?
• Successful development of pig enteroids
• Currently: Characterization, evaluation of freezing-
thawing effects
• Collaboration with Dr. Milena Saqui-Salces
Pig organoids?
https://www.diabeticool.com/
HE
PAS – globlet cells
Ki-67 - proliferation
Final considerations
• Intestinal organoids
• The most promising “in vivo/ex vivo” model to investigate
host-pathogen interactions
• Closer to in vivo, but with controlled experimental
conditions
• Need to acquire expertise – new technique
• Host-pathogen interactions of important enteropathogens
in swine industry
• Development of new strategies of treatment and control
• Dr. Milena Salqui-Salces
– Ashley Manicor
– Yue Guo
– Lekha Medida
• Dr. Gebhart’s lab
– Lacey M. Lund
– Erika Vasquez
– Amanda Daniel
• VDL Histo and IHC labs
Acknowledgements
Thank you!
Questions?
Talita Resende
resen023@umn.edu
Acknowledgements

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Dr. Talita Resende - Organoids as an invitro model for enteric diseases

  • 1. Organoids as an in vitro model for enteric disease Talita Resende PhD candidate Advisors: Dr. Connie Gebhart & Dr. Fabio Vannucci Collaborator: Dr. Milena Saqui-Salces Allen D. Leman Swine Conference 2018
  • 2. Enteric diseases – infectious agents Image adapted from: Holman, Devin B., et al MSystems 2.3 (2017): e00004-17.
  • 3. Enteric diseases – infectious agents Image adapted from: Holman, Devin B., et al MSystems 2.3 (2017): e00004-17. PEDV TGEV PDCoV E. coli, enterotoxigenic Rotaviruses Brachyspira hyodysenteriae, B. hampsonii, B. pilosicoli Salmonella Typhimurium, Cholerasuis Lawsonia intracellularis Coccidiosis Trichuris Ascaris suis
  • 4. Enteric diseases – infectious agents Images: Holman, Devin B., et al MSystems 2.3 (2017): e00004-17 Van den Bossche, L. (2017) (Doctoral dissertation, Ghent University)..
  • 5. Host–pathogen interactions Intestine Dutta and Clevers, 2017 • Animal models Instrumental to host–microbe interactions • Well established • Uncontrollable microbial diversity Inter-species variances Expensive Ethical concerns yourgenome.org gdforum.freeforums.net zdmsociety.org https://www.diabeticool.com/
  • 6. Host–pathogen interactions Intestine Dutta and Clevers, 2017 Pampaloni et al, 2007 • Single cell type cultures Closer to the ‘real situation’ • Well established • Relatively cheap • Lack the relationship between different cell types gdforum.freeforums.net zdmsociety.org Gebhart’s lab
  • 7. • Organoids •Organotypic tridimensional (3D) structures •Matrix/scaffold based 3D in vitro culture systems –Supports the 3D growth •Originated from –Embryonic stem cells –Induced pluripotent cells –Primary tissues https://www.rndsystems.com cience.sciencemag.org Brain Intestine Liver Lung Host–pathogen interactions Dutta and Clevers, 2017 Pampaloni et al, 2007
  • 8. • 3D in vitro/ex vivo models = Organoids • Present all organ-specific cell types on their surface Function as the tissue of origin • Self-renewed and self-organized • Reduce use of animals (1 animal = numerous organoids) Requires expertise to be established routinely Host–pathogen interactions Dutta and Clevers, 2017 Pampaloni et al, 2007
  • 9. •Small intestine – enteroids •Colon - colonoids •Crypts and villi (small intestine) morphologically similar to the intestinal conformation •In vitro model with tissue-like morpho-physiology Intestinal organoids Saqui-Salces’ and Gebhart’s labs Fatehullah et al, 2016 Dutta and Clevers, 2017 https://www.rndsystems.com
  • 11. • Some examples of applicability • Portal of entry • Shigella and M cells • Cellular modulation • Cryptosporidium parvum, Salmonella • Cytokine release and protein production • Clostridium difficile • Viral replication • Human Norovirus, Rotavirus • Non-infectious diseases: colorectal carcinoma Intestinal organoids - Host-pathogen interactions
  • 12. • Cryptosporidium parvum (Zhang et al, 2016) • Inhibitory effect on the ex vivo propagation of enteroids from mice • Decreased expression level of intestinal stem cell markers Stem cells Intestinal organoids - Host-pathogen interactions
  • 13. • Salmonella enterica Serovar Typhimurium • Cytokine release • Impact in production of α-defensin-5 (Crp5) Wilson et al, 2015 Forbester et al, 2015 Intestinal organoids - Host-pathogen interactions
  • 14. • Rotavirus • Susceptibility to infection  treatment efficacy tests Yin et al, 2017Yin et al, 2015 Mab “Antivirulence therapy” Intestinal organoids - Host-pathogen interactions
  • 16. Our project albeitar.portalveterinaria.co m/ Vannucci & Gebhart • Proliferative enteropathy • Caused by Lawsonia intracellularis • Cellular proliferation – crypts • Unknown mechanism • Cell monocultures • Used over the years as in vitro models • Do not replicate cellular proliferation (Resende et al, 2018 – submitted for publication)
  • 17. Supernatant (SN) Our project Media • Immunolabelling • RT-qPCR • Enteroid size (Area) L. intracellularis *Mouse enteroids
  • 18. Apical side Lumen Basal DAPI L. intracellularis Nuclei L. intracellularis Our project Proliferation marker TAC marker Goblet cells marker
  • 19. • Mouse enteroids are permissive to infection • Changes at 3dpi: area, Ki-67 expression, Muc2 expression • Check cellular proliferation, modulation of epithelial cells, apoptosis rate • Then what? • Initiate further research of the mechanisms of proliferation • New strategies for controlling the disease (antivirulence treatment, antibiotic alternatives) Our project
  • 20. • Pig enteroids characterized (Gonzalez et al, 2013) • Nutrition investigation (Koltes and Gabler, 2015) • No host-pathogen interaction study to date • Where are we? • Successful development of pig enteroids • Currently: Characterization, evaluation of freezing- thawing effects • Collaboration with Dr. Milena Saqui-Salces Pig organoids? https://www.diabeticool.com/ HE PAS – globlet cells Ki-67 - proliferation
  • 21. Final considerations • Intestinal organoids • The most promising “in vivo/ex vivo” model to investigate host-pathogen interactions • Closer to in vivo, but with controlled experimental conditions • Need to acquire expertise – new technique • Host-pathogen interactions of important enteropathogens in swine industry • Development of new strategies of treatment and control
  • 22. • Dr. Milena Salqui-Salces – Ashley Manicor – Yue Guo – Lekha Medida • Dr. Gebhart’s lab – Lacey M. Lund – Erika Vasquez – Amanda Daniel • VDL Histo and IHC labs Acknowledgements Thank you! Questions? Talita Resende resen023@umn.edu Acknowledgements