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Evolution and Biodiversity
IB TOPIC 5
5.1 Evidence for Evolution
• Evolution – cumulative change in the
heritable characteristics of a
population.
• Changes must be passed on genetically
• Usually takes a long period of time
• One change is not enough to make major
impact
• Does not affect just one individual
Evolution
Fossil Record
• Sedimentary Rock
• As layers are put down the inorganic
components of:
• Plants
• Animals
• Bacteria
are preserved.
• Older the rock layers ----- older the
fossil
Selective Breeding
• Darwin - humans select desirable traits in
domesticated animals.
• Artificial Selection – foundation of selective
breeding in Plants and Animals.
• Mating of organisms with favorable traits.
Eliminating traits with negative characteristics
• May affect other characteristics
• Furthers variation of species
Homologous Structures
• Homologous – similar
• Similar characteristics seen in organisms
that evolved from a common ancestor
• Divergent Evolution
• Seen in organisms over wide geographical
ranges
• Adaptive Radiation – single species
gives rise to several (or many) related
species
• Finches of Galapagos Islands
Darwin’s Finches
Pentadactyl Limbs
Analogous Structures
• Similar structure and function BUT….
NO COMMON ANCESTOR
• Convergent Evolution - characteristics
becomes more similar as they evolve and
adapt to similar environments.
5.2 - Theory of Evolution by Natural Selection
Charles Darwin
• NATURAL
SELECTION
Alfred Wallace
• INTELLIGENT
EVOLUTION
Natural Selection – Five Parts
Be ready to explain the following:
1. Populations tend to produce more offspring than the
environment can support.
2. There will be a struggle for survival.
3. Variation will exist among the offspring produced.
4. Natural Selection will favor the offspring that:
I. Possess the best traits
II. Are most “Fit”
III. Surviving members will reproduce and pass on fit traits.
5. Over many generations…gene pool changes
Struggle for Survival
•Competition for Food
•Predation
•Parasitism
•Disease
•Competition for Mates
•Competition for Living Space
Variations - Random Mutation
• Permanent change in the nucleotide
sequence of the genome.
• 7 different types….frame -shift, deletion,
insertion…..
Random Mutation occur during:
i. DNA Replication
ii. Viral Infection
DOES NOT OCCUR VERY OFTEN!
Deletion
Variations - Sex Cell Production
Meiosis:
Crossing Over
• Occurs during Prophase I
• Creates New combination of
alleles
• Genetic Recombination
Independent Assortment
• Random
• Alleles sort independently
during Metaphase I
Variations - Sexual Reproduction
Fertilization
• Alleles from Male and Female combine
• Larger the number of chromosomes greater the variety
• HUMANS – appx. 8,400,000
Required Examples of Natural
Selection
•Melanistic Insects(transient polymorphism)
•Beaks of Finches on Daphne
Major(adaptive radiation)
•Antibiotic Resistance
Melanistic Insects
• Peppered Moth (Biston betularia)
• Selection Pressure: Predation by Birds
• Variation:
White (typica) Before Black(carbonaria) After
Environmental change – sooty pollution from factories
Result – typica stands out. More carbonaria survive.
Has reversed with clean air policies!
Beaks of Finches
Beaks of Finches
• Galapagos Islands – 14 islands, off coast of
Ecuador
• Unknown as to how finches arrived.
• Selection Pressure: increased competition for food
• Variation: different beak shapes and sizes to consume
different food sources. (03-04 – more smaller beaks)
• Environmental change: drought (2003-04). Small seeds
available; large seeds in shorter supply.
• Adaptive radiation
• Speciation
Antibiotic Resistance
Bacteria:
• Short life cycle. Can reproduce quickly.
• Why are they resistant? How does resistance occur?
• Mutation
• Plasmid transfer
Antibiotic Resistance
• Bacteria – Staphylococcus aureus
• Antibiotic: Methycillin (selection pressure – addition of)
• Variation
I. Methycillin Resistant (MRSA)
II. Methycillin Suseptible (MSSA)
Environmental change: addition of methycillin
Result: MSSA killed, MRSA survives – increases &
dominates
Methycillin no longer effective
MRSA
5.3 – Classification and Biodiversity
• Carl Linnaeus (1735)
Binomial Nomenclature – two-name system; universal
system
• Homo sapiens - human
• Canis familiaris - dog
• Zea mays - corn
Remember – ALWAYS CAPTIALIZE FIRST NAME
Hierarchy of Taxa
• Taxonomy – study of classification
•Domain System – 3 domains
1. Eubacteria
2. Archaea
3. Eukaryote
Principle Taxa
Taxa are organized from INCLUSIVE to EXCLUSIVE:
DOMAIN
KINGDOM
PHYLUM
CLASS
ORDER
FAMILY
GENUS
species
Taxonomists - can reclassify if evidence warrants
Hierarchy of Classification
animal
Domain - Eukarya
Kingdom – Animal
Phylum - Chordata
Class – Mammalia
Order - Primate
Family - Hominidae
Genus - Homo
Species - sapiens
plant
Domain - Eukarya
Kingdom - Plantea
Phylum - Magnoliophyta
Class - Lilopsida
Order - Poales
Family - Poaceae
Genus - Zea
species - mays
Some Final thoughts….
• As technology improves several species have been
reclassified for a variety of reasons.
• Artificial Classification –uses arbitrary characteristics to
classify
• Natural Classification – uses ancestry
• Tries to make sense of an organisms place in the world
• Shows evolutionary links
• Predicts characteristics shared by members of a group
Bryophyta
Fillicinophyta
Coniferophyta
Angiospermophyta
Porifera
Radial vs. Bilateral
• Radial – circular with
one center point. (pie)
• Bilateral – can be
divided into “mirror”
halves through a
single plane
Cnidaria
Platyhelminthes and Annelid
Platyhelminthes
Annelid
Mollusca
Arthropod
Chordata
Dichotomous Keys
Used to identify
organisms based on
structures and features
that organisms possess
•Each level contains two
statements
5.4 - Cladisitics
• Clade – a complete group of
members who have evolved from a
common ancestor.*
• Cladogram – a branching
representation of clades that show
evolutionary relationships.*
• Phylogeny – system of classifying
organisms based on evolutionary
origins and changes over
time.(phylogenic tree)*
Phylogenic Trees
Characteristics for Classification
1.Morphology
2.Anatomy
3.Cytology
4.Photochemistry
5.Chromosome numbers
6.Molecular differences
Formation of Clades
What evidence must be obtained to assign a species to a
clade?
1. ALL ORGANISMS PRODUCE DNA.
2. ALL ORGANISMS PRODUCE PROTEINS FROM THE
SAME 20 AMINO ACIDS CODED FOR IN SEQUENCS
BY DNA.
3. CLOSER THE PROTEIN STRUCTURE…CLOSELY
RELATED
 USE A COMMON PROTEIN (cytochrome c)
4. CHANGES IN PROTEINS IN
SPECIES….EVOLUTIONARY CLOCK
Suggests common ancestry for ALL living organisms.
Amino Acid Sequence of Cytochrome c
Organism # of a.a. that differ from Humans
Yeast 42
Wheat germ 37
Fruit fly 24
Bullfrog 20
Pigeon 12
Cow 10
Rabbit 9
Rhesus monkey 1
Chimpanzee 0
Vertebrate
Hai
r
Shelle
d eggs
Amniotic Egg
Four
Limbs
Bony
Skeleton
Each clade
is determined by
common
characteristics
of its members that are
different from that of
the other species from
which it has diverged
Homologous vs. Analogous
REMEMBER:
HOMOLOGOUS – inherited from a common ancestor
ANALOGOUS - do not stem from a common ancestor.
Bats – Birds – Bugs > >>>>>WINGS
Constructing Cladograms
• These two cladograms are identical (although they don’t look it)
• The shape and the order of the terminal nodes does not matter.
• The only information to be gathered from the cladograms below is the
order of nesting of sister clades and the relative relatedness of
species
Human HumanChimp ChimpGorilla Gorilla
Root
Terminal nodes Sister clades: have a
common ancestor
Out group: Defines
the ancestral
characters
Nodes:
Common ancestors
Thisis acomputergeneratedcladogramfor bacteria.
Building Cladograms
Characters Shark Frog Kangaroo Human
Vertebrae X X X X
Two pairs of
limbs
X X X
Mammary glands X X
Placenta X
1. Compile a table of the characters being
compared.
Modified from:
http://www.bu.edu/gk12/eric/cladogram.pdf
Vertebrae:
Shark
Two Pairs
of Limbs:
Frog
Mammary
Glands:
Kangaroo
Placenta:
Human
2) Use the data to
construct a Venn diagram,
Start with the
characteristic
shared by all
taxa in the
biggest circle
and work
inwards
Shark Frog Kangaroo Human
Mammary Glands
Lungs
Vertebra
e
Placenta
3) Convert the Venn diagram into a
cladogram
Analyze cladograms in terms of phylogenetic relationships
1
2
3
DCBA
Of the three nodes,
3 is most recent and 1
occurred earliest.
Node 3 is the most recent
common ancestor for C and D
Node 2 is the most recent common
ancestor for B and C
Node 3 is the common ancestor of all taxa
And so on…

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Evolution and Biodiversity 2016

  • 2. 5.1 Evidence for Evolution • Evolution – cumulative change in the heritable characteristics of a population. • Changes must be passed on genetically • Usually takes a long period of time • One change is not enough to make major impact • Does not affect just one individual Evolution
  • 3. Fossil Record • Sedimentary Rock • As layers are put down the inorganic components of: • Plants • Animals • Bacteria are preserved. • Older the rock layers ----- older the fossil
  • 4.
  • 5.
  • 6.
  • 7.
  • 8. Selective Breeding • Darwin - humans select desirable traits in domesticated animals. • Artificial Selection – foundation of selective breeding in Plants and Animals. • Mating of organisms with favorable traits. Eliminating traits with negative characteristics • May affect other characteristics • Furthers variation of species
  • 9.
  • 10.
  • 11. Homologous Structures • Homologous – similar • Similar characteristics seen in organisms that evolved from a common ancestor • Divergent Evolution • Seen in organisms over wide geographical ranges • Adaptive Radiation – single species gives rise to several (or many) related species • Finches of Galapagos Islands
  • 14.
  • 15. Analogous Structures • Similar structure and function BUT…. NO COMMON ANCESTOR • Convergent Evolution - characteristics becomes more similar as they evolve and adapt to similar environments.
  • 16.
  • 17.
  • 18. 5.2 - Theory of Evolution by Natural Selection Charles Darwin • NATURAL SELECTION Alfred Wallace • INTELLIGENT EVOLUTION
  • 19. Natural Selection – Five Parts Be ready to explain the following: 1. Populations tend to produce more offspring than the environment can support. 2. There will be a struggle for survival. 3. Variation will exist among the offspring produced. 4. Natural Selection will favor the offspring that: I. Possess the best traits II. Are most “Fit” III. Surviving members will reproduce and pass on fit traits. 5. Over many generations…gene pool changes
  • 20. Struggle for Survival •Competition for Food •Predation •Parasitism •Disease •Competition for Mates •Competition for Living Space
  • 21. Variations - Random Mutation • Permanent change in the nucleotide sequence of the genome. • 7 different types….frame -shift, deletion, insertion….. Random Mutation occur during: i. DNA Replication ii. Viral Infection DOES NOT OCCUR VERY OFTEN!
  • 23. Variations - Sex Cell Production Meiosis: Crossing Over • Occurs during Prophase I • Creates New combination of alleles • Genetic Recombination Independent Assortment • Random • Alleles sort independently during Metaphase I
  • 24. Variations - Sexual Reproduction Fertilization • Alleles from Male and Female combine • Larger the number of chromosomes greater the variety • HUMANS – appx. 8,400,000
  • 25. Required Examples of Natural Selection •Melanistic Insects(transient polymorphism) •Beaks of Finches on Daphne Major(adaptive radiation) •Antibiotic Resistance
  • 26. Melanistic Insects • Peppered Moth (Biston betularia) • Selection Pressure: Predation by Birds • Variation: White (typica) Before Black(carbonaria) After Environmental change – sooty pollution from factories Result – typica stands out. More carbonaria survive. Has reversed with clean air policies!
  • 28. Beaks of Finches • Galapagos Islands – 14 islands, off coast of Ecuador • Unknown as to how finches arrived. • Selection Pressure: increased competition for food • Variation: different beak shapes and sizes to consume different food sources. (03-04 – more smaller beaks) • Environmental change: drought (2003-04). Small seeds available; large seeds in shorter supply. • Adaptive radiation • Speciation
  • 29. Antibiotic Resistance Bacteria: • Short life cycle. Can reproduce quickly. • Why are they resistant? How does resistance occur? • Mutation • Plasmid transfer
  • 30. Antibiotic Resistance • Bacteria – Staphylococcus aureus • Antibiotic: Methycillin (selection pressure – addition of) • Variation I. Methycillin Resistant (MRSA) II. Methycillin Suseptible (MSSA) Environmental change: addition of methycillin Result: MSSA killed, MRSA survives – increases & dominates Methycillin no longer effective
  • 31. MRSA
  • 32. 5.3 – Classification and Biodiversity • Carl Linnaeus (1735) Binomial Nomenclature – two-name system; universal system • Homo sapiens - human • Canis familiaris - dog • Zea mays - corn Remember – ALWAYS CAPTIALIZE FIRST NAME
  • 33. Hierarchy of Taxa • Taxonomy – study of classification •Domain System – 3 domains 1. Eubacteria 2. Archaea 3. Eukaryote
  • 34. Principle Taxa Taxa are organized from INCLUSIVE to EXCLUSIVE: DOMAIN KINGDOM PHYLUM CLASS ORDER FAMILY GENUS species Taxonomists - can reclassify if evidence warrants
  • 35. Hierarchy of Classification animal Domain - Eukarya Kingdom – Animal Phylum - Chordata Class – Mammalia Order - Primate Family - Hominidae Genus - Homo Species - sapiens plant Domain - Eukarya Kingdom - Plantea Phylum - Magnoliophyta Class - Lilopsida Order - Poales Family - Poaceae Genus - Zea species - mays
  • 36. Some Final thoughts…. • As technology improves several species have been reclassified for a variety of reasons. • Artificial Classification –uses arbitrary characteristics to classify • Natural Classification – uses ancestry • Tries to make sense of an organisms place in the world • Shows evolutionary links • Predicts characteristics shared by members of a group
  • 42. Radial vs. Bilateral • Radial – circular with one center point. (pie) • Bilateral – can be divided into “mirror” halves through a single plane
  • 48. Dichotomous Keys Used to identify organisms based on structures and features that organisms possess •Each level contains two statements
  • 49.
  • 50. 5.4 - Cladisitics • Clade – a complete group of members who have evolved from a common ancestor.* • Cladogram – a branching representation of clades that show evolutionary relationships.* • Phylogeny – system of classifying organisms based on evolutionary origins and changes over time.(phylogenic tree)*
  • 53. Formation of Clades What evidence must be obtained to assign a species to a clade? 1. ALL ORGANISMS PRODUCE DNA. 2. ALL ORGANISMS PRODUCE PROTEINS FROM THE SAME 20 AMINO ACIDS CODED FOR IN SEQUENCS BY DNA. 3. CLOSER THE PROTEIN STRUCTURE…CLOSELY RELATED  USE A COMMON PROTEIN (cytochrome c) 4. CHANGES IN PROTEINS IN SPECIES….EVOLUTIONARY CLOCK Suggests common ancestry for ALL living organisms.
  • 54.
  • 55.
  • 56. Amino Acid Sequence of Cytochrome c Organism # of a.a. that differ from Humans Yeast 42 Wheat germ 37 Fruit fly 24 Bullfrog 20 Pigeon 12 Cow 10 Rabbit 9 Rhesus monkey 1 Chimpanzee 0
  • 57. Vertebrate Hai r Shelle d eggs Amniotic Egg Four Limbs Bony Skeleton Each clade is determined by common characteristics of its members that are different from that of the other species from which it has diverged
  • 58. Homologous vs. Analogous REMEMBER: HOMOLOGOUS – inherited from a common ancestor ANALOGOUS - do not stem from a common ancestor. Bats – Birds – Bugs > >>>>>WINGS
  • 59. Constructing Cladograms • These two cladograms are identical (although they don’t look it) • The shape and the order of the terminal nodes does not matter. • The only information to be gathered from the cladograms below is the order of nesting of sister clades and the relative relatedness of species
  • 60. Human HumanChimp ChimpGorilla Gorilla Root Terminal nodes Sister clades: have a common ancestor Out group: Defines the ancestral characters Nodes: Common ancestors
  • 63. Characters Shark Frog Kangaroo Human Vertebrae X X X X Two pairs of limbs X X X Mammary glands X X Placenta X 1. Compile a table of the characters being compared. Modified from: http://www.bu.edu/gk12/eric/cladogram.pdf
  • 64. Vertebrae: Shark Two Pairs of Limbs: Frog Mammary Glands: Kangaroo Placenta: Human 2) Use the data to construct a Venn diagram, Start with the characteristic shared by all taxa in the biggest circle and work inwards
  • 65. Shark Frog Kangaroo Human Mammary Glands Lungs Vertebra e Placenta 3) Convert the Venn diagram into a cladogram
  • 66. Analyze cladograms in terms of phylogenetic relationships 1 2 3 DCBA Of the three nodes, 3 is most recent and 1 occurred earliest. Node 3 is the most recent common ancestor for C and D Node 2 is the most recent common ancestor for B and C Node 3 is the common ancestor of all taxa And so on…

Notes de l'éditeur

  1. Example of adaptive radiation observed by Darwin finches in the Galapagos Islands (nicknamed Darwin's finches). Darwin speculated that the common ancestor of all existing species of Galapagos finches is a seed-eating finch nesting ground. This finch has probably given rise to two lineages, one of finches nesting ground, the other finches tree. The first line has diversified into six seed-eating species and the second in seven insectivorous species and seed-eating species. Here we see a female of each species. Archives Larousse